Gene Information

Name : aldB (PANA5342_2659)
Accession : YP_005196089.1
Strain : Pantoea ananatis LMG 5342
Genome accession: NC_016816
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2782741 - 2784261 bp
Length : 1521 bp
Strand : -
Note : -

DNA sequence :
ATGCGCTATGCTGCTCCAGGAGAATCCGGTTCTCTCATCACGCTGCAAAAGCACTATGGTAATTTCATCAATGGGGAGTT
CGTTGCGCCGGTCAATGGCCACTACTTCACCAATACCTCGCCCGTTAATGGTTCAGATGCCGGGGCGTTTCCCCGCTCAG
ACAAGGCAGACGTCGATAACGCGGTCGCTGCCGCTGCCGCCGCGGCGGATGCCTGGGGAAAAACCTCGCCTCAGCAGCGC
GCCCTGGTGCTGCTTAAAATCGCCGATCGGCTGGAAGAGAAGCTGGAATACCTGGCGGTAAATGAAACCTGGGACAACGG
TAAACCGGTTCGTGAAACGCTGGCCGCCGATATGCCGCTGGCGGTGGATCACTTCCGCTATTTTGCCGGTTGTGTCAGGG
CGCAGGAGGGCAGCGCGGCGGAGATCGACGAATTTACTGCCGCCTATCACTTTCATGAACCCCTGGGCGTGGTGGCGCAG
ATCATCCCGTGGAACTTTCCGCTGCTGATGGCGGCATGGAAGCTGGCGCCGGCCCTGGGGGCAGGGAACTGCGTGGTGCT
CAAGCCCGCGGAGCAAACGCCGCTGTCGATTACCCTGTTTGTTGACCTGATTAAAGATCTGCTGCCGCCCGGCGTGGTCA
ACGTGGTCCACGGTTATGGTAAAGAAGCGGGTGAGGCGCTGGCCTCCCATCCGGGCATTGCCAAAGTGGCATTTACGGGA
TCGACGGCGACGGGCGGCCATATCCTGGAACTGGCGGCGAAAAGCTTGATTCCGTCTACGGTCGAACTGGGCGGGAAATC
GCCGAACATCTTTTTCGAAGATATCATGCAGGCCGAAGAAAGCTTTATTGAAAAAGCGGCGGAAGGGGTTGTGCTTGGCT
TCCTGAATCAGGGTGAAGTCTGTACCTGTCCGTCGCGGGCGCTGGTGCAGGAGTCCATTTACGAGCCCTTTATGGCGGCA
GTGCTTAAACGCATTAAAACCATCAAGCGCGGCGATCCCATGGATACGGAAACGATGGTGGGCGCGCAGGCTTCTCAGCA
GCAGTTCGATAAAATTCTTTCCTATCTGGAGATCGCCCGTCAGGAAGGGGCCGAGGTGCTGATCGGCGGCGGTGTTGAGA
CGCTCGATGACACGCTGGCCAGCGGCTACTACATTCAGCCGACGCTGCTGAAAGGCAACAACAGCATGCGGGTATTCCAG
GAAGAGATCTTTGGCCCGGTGGTGGGCATCACCACCTTCAAGGATGAGGCAGAGGCCATCGCCATCGCCAACGACTCCAT
CTACGGCCTGGGCGCGGGCGTCTGGACGCGGGATATCAACCGGGCCTACCGCGTCGGGCGGGCAATCAAAGCCGGACGTG
TCTGGACGAACTGCTATCACCTTTATCCCGCTCACGCGGCCTTCGGTGGCTATAAAAAATCAGGTATCGGTCGCGAGACG
CACAAGATGATGCTTGATCACTATCAGCAGACGAAAAATCTGCTGGTAAGCTACAGCATCCAGCCGCTTGGCTTCTTCTG
A

Protein sequence :
MRYAAPGESGSLITLQKHYGNFINGEFVAPVNGHYFTNTSPVNGSDAGAFPRSDKADVDNAVAAAAAAADAWGKTSPQQR
ALVLLKIADRLEEKLEYLAVNETWDNGKPVRETLAADMPLAVDHFRYFAGCVRAQEGSAAEIDEFTAAYHFHEPLGVVAQ
IIPWNFPLLMAAWKLAPALGAGNCVVLKPAEQTPLSITLFVDLIKDLLPPGVVNVVHGYGKEAGEALASHPGIAKVAFTG
STATGGHILELAAKSLIPSTVELGGKSPNIFFEDIMQAEESFIEKAAEGVVLGFLNQGEVCTCPSRALVQESIYEPFMAA
VLKRIKTIKRGDPMDTETMVGAQASQQQFDKILSYLEIARQEGAEVLIGGGVETLDDTLASGYYIQPTLLKGNNSMRVFQ
EEIFGPVVGITTFKDEAEAIAIANDSIYGLGAGVWTRDINRAYRVGRAIKAGRVWTNCYHLYPAHAAFGGYKKSGIGRET
HKMMLDHYQQTKNLLVSYSIQPLGFF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 5e-150 63
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 2e-154 61
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 2e-154 61
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 2e-154 61
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 6e-154 61

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
aldB YP_005196089.1 aldehyde dehydrogenase VFG0082 Protein 2e-150 63