Gene Information

Name : katA (PANA5342_2324)
Accession : YP_005195754.1
Strain : Pantoea ananatis LMG 5342
Genome accession: NC_016816
Putative virulence/resistance : Unknown
Product : catalase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2432083 - 2433549 bp
Length : 1467 bp
Strand : +
Note : -

DNA sequence :
ATGAGTCATGATGAGCGTAAACCCACCACAACCGATGCCGGTATTCCGGTGGCCAGCGATGAGCATTCCCTTTCCGTCGG
TCCCGATGGCCCCCTGGTGCTTCACGACCATTACCTGATTGAGCAGATGGCCAACTTCAACCGGGAACGCATTCCCGAGC
GGCAGCCCCATGCGAAAGGAAGCGGCGCATTTGGCTTTTTTGAGGTGACTGAAGATGTGAGTCGCTACACCAAAGCCAAC
GTTTTTCAGCCGGGCACGAAAACTGACGTGGTGATGCGTTTTTCAACGGTGGCTGGCGAGCGCGGCAGCCCGGATACCTG
GCGCGATCCGCGCGGATTTTCCATTAAGTTTTATACCCGCGAAGGCAATTACGACATGGTGGGCAACAATACACCGGTGT
TCTTTATTCGCGATCCCATGAAGTTTCAGCACTTCATTCGCTCGCAAAAGCGCCGCGCCGATAACAATCTGCGTGACAAT
GATATGCAGTGGGATTTCTGGACGCTGTCACCCGAATCCTCGCATCAGGTCACCTGGCTAATGGGCGACCGTGGGATTCC
TAAAAACTGGCGTCATATGAATGGGTATTCCAGCCACACTTATATGTGGGTCAATGAACAGGGTGAAAAGTTCTGGGTGA
AATACCATTTCCACACCGACCAGGGCATTGAATACCTGACGCAGGAGCAAGCCGATAAACTGGCAGGCGAAGATGGCGAT
TACCATACGCGTGACCTGTTTATGTCGATCAAAAACGGCCAATTCCCGAGCTGGACCCTGTACATGCAGATCATGCCGTT
TGCTGAGGCTGACAGCTATCGTTTCAATCCTTTCGATTTGACCAAGGTGTGGCCGCACAGTGATTATCCGCTGATCAAAG
TTGGCAAGCTGACGCTGAACCGCAACCCAACGGACAACCATGCGCAGATTGAACAAGCCGCATTTGAACCGAATAATCTG
GTCCCTGGCATCGGGCTCAGCCCGGATAAGATGCTGATTGGTCGCGTGTTTGCCTATGCCGACGCCCATCGCGCACGGCT
TGGAGTGAACTATAAACAGATCCCGGTTAATGCCCCGCAGTCGCCGGTGAACAGCTACAGCAAGGACGGTGCGATGCGGA
TGAATCCGGTATCCGACCCGGTTTACGCCCCCAACAGCAAAGGCGGCCCGGTGGCAGATGGCGACCGCTATCCCACCGAC
TCGGTCTGGTCAGCCAGCGGCGACATGGTTCGTGCCCCTTACTCACTGCGTCAGGACGATGACGACGTGGGCCAGGCAAA
TACCCTGATCAACAAGGTAATGGATGATGCCGCGCGCGACAGGCTGGTCAACAACGTTAGCGGTCATCTGCTGAACGGGG
TTGAAGAGCCGGTGCTTTCGCGAGCGTTTCAGTACTGGCGCAACATCGACCAGACCATTGGCGATCGTATCGCCAGCAAG
GTGCAGGAAGCACGCGCTAAGCGATAA

Protein sequence :
MSHDERKPTTTDAGIPVASDEHSLSVGPDGPLVLHDHYLIEQMANFNRERIPERQPHAKGSGAFGFFEVTEDVSRYTKAN
VFQPGTKTDVVMRFSTVAGERGSPDTWRDPRGFSIKFYTREGNYDMVGNNTPVFFIRDPMKFQHFIRSQKRRADNNLRDN
DMQWDFWTLSPESSHQVTWLMGDRGIPKNWRHMNGYSSHTYMWVNEQGEKFWVKYHFHTDQGIEYLTQEQADKLAGEDGD
YHTRDLFMSIKNGQFPSWTLYMQIMPFAEADSYRFNPFDLTKVWPHSDYPLIKVGKLTLNRNPTDNHAQIEQAAFEPNNL
VPGIGLSPDKMLIGRVFAYADAHRARLGVNYKQIPVNAPQSPVNSYSKDGAMRMNPVSDPVYAPNSKGGPVADGDRYPTD
SVWSASGDMVRAPYSLRQDDDDVGQANTLINKVMDDAARDRLVNNVSGHLLNGVEEPVLSRAFQYWRNIDQTIGDRIASK
VQEARAKR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
katA YP_005126717.1 catalase Not tested Not named Protein 1e-123 55
katA YP_005680448.1 catalase Not tested PiCp 3 Protein 9e-121 53
katA YP_005682539.1 catalase Not tested PiCp 3 Protein 9e-121 53
katA YP_003782575.1 catalase Not tested PiCp 3 Protein 9e-121 53
katA YP_005684630.1 catalase Not tested PiCp 3 Protein 9e-121 53
katA ABD94664.1 catalase isozyme A Not tested ExoU island A Protein 8e-101 48