Gene Information

Name : arsB (PANA5342_2299)
Accession : YP_005195729.1
Strain : Pantoea ananatis LMG 5342
Genome accession: NC_016816
Putative virulence/resistance : Resistance
Product : arsenical pump membrane protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2407741 - 2409024 bp
Length : 1284 bp
Strand : +
Note : -

DNA sequence :
ATGTTTCTGGCAGGCGCTATATTCGTCCTGACACTGGTACTGGTTATCTGGCAGCCAAAAGGGCTGAGTATTGGCTGGAG
TGCTGTTATCGGGGCTGCGCTGGCCCTGCTGACGGGCGTAGTGCATTTCGGCGATATTACGGCCGTCTGGCAGATCGTTT
GGAACGCGACGGCCACGTTTATCGCGGTGATTATCATCAGCCTGCTGCTCGATGAATCTGGTTTTTTTGAGTGGGCTGCC
CTGCACGTTTCCCGATGGGGTGGCGGTAAAGGCAGGCTGCTGTTCACGTATAGTGTTCTGCTGGGTGCGGCAGTGGCGGC
CTTGTTTGCGAATGACGGGGCGGCACTGATCCTGACGCCTGTTGTCATTGCCATGCTGTTGGCGCTGGGCTTCAGCCCCG
GCGCAACGCTGGCGTTTGTGATGGCGGCAGGTTTTATCGCTGACACATCCAGCCTGCCACTCATCGTATCGAACCTGGTT
AACATCGTGACGGCGGACTTTTTTAAGCTGGGATTCAGCGAATACGCGTCTGTCATGATGCCGGTCAACATGGCATCCGT
GGCGGCCACGCTGGTTATGCTTCACTTCTTCTTCCGTAAAGACATCCCGGTCGCCTATGACATGGCAAAACTAAAGGTAC
CACGGGAAGCCATTCGTGACGTGCGAACCTTCAAAGCCGGATGGCTGGTTCTGTGTCTGTTGCTGACCGGTTTTTTTGCT
CTGGAGCCGCTCGGCGTTCCGGTCAGTCTGGTTGCTGCGGTCGCGGCATTTATTCTGTGGCTGGTTGCCCGTAAAGGACA
GGTGATTGATACCCGTAAAGTCCTGAAAGGCGCGCCCTGGCAGATCGTCACCTTCTCGCTGGGTATGTATCTGGTGGTTT
ATGGCCTGCGTAACGCCGGACTGACGGATTACCTCTCGTCCGCCCTGAACGGGTTTGCAGAGCATGGTGTATGGGGAGCC
ACATTCGCTACCGGTTTTCTGACGGCCTTTCTGTCATCGGTGATGAACAACATGCCTACCGTCCTGGTCGGTGCCCTTTC
CATTGATGGCAGCACGGCTGAGGGTGTGGTGAAAGAGGCGATGATTTACGCCAATATCATCGGTTGCGATCTTGGTCCGA
AAATCACCCCCATCGGCAGCCTGGCGACCCTGCTGTGGCTACACGTTCTGGCGCAGAAAAATATCACCATCAGCTGGAGC
AACTACTTCCGCGTGGGCGTTGTGATGACCCTGCCGGTACTTTTTGTCACGCTGGCGGCGCTGGCCCTGCGTCTTTCTGT
TTAA

Protein sequence :
MFLAGAIFVLTLVLVIWQPKGLSIGWSAVIGAALALLTGVVHFGDITAVWQIVWNATATFIAVIIISLLLDESGFFEWAA
LHVSRWGGGKGRLLFTYSVLLGAAVAALFANDGAALILTPVVIAMLLALGFSPGATLAFVMAAGFIADTSSLPLIVSNLV
NIVTADFFKLGFSEYASVMMPVNMASVAATLVMLHFFFRKDIPVAYDMAKLKVPREAIRDVRTFKAGWLVLCLLLTGFFA
LEPLGVPVSLVAAVAAFILWLVARKGQVIDTRKVLKGAPWQIVTFSLGMYLVVYGLRNAGLTDYLSSALNGFAEHGVWGA
TFATGFLTAFLSSVMNNMPTVLVGALSIDGSTAEGVVKEAMIYANIIGCDLGPKITPIGSLATLLWLHVLAQKNITISWS
NYFRVGVVMTLPVLFVTLAALALRLSV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
arsB2 YP_001007633.1 arsenical pump membrane protein Not tested YAPI Protein 1e-152 81
arsB YP_252017.1 arsenical pump membrane protein Not tested SCCmec Protein 4e-103 57
arsB YP_005754065.1 arsenical pump membrane protein Not tested Type-XI SCCmec Protein 9e-101 56
SH0109 YP_252024.1 arsenical pump membrane protein Not tested SCCmec Protein 3e-106 56

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
arsB YP_005195729.1 arsenical pump membrane protein BAC0578 Protein 7e-153 81
arsB YP_005195729.1 arsenical pump membrane protein BAC0576 Protein 5e-153 81
arsB YP_005195729.1 arsenical pump membrane protein BAC0577 Protein 3e-149 80
arsB YP_005195729.1 arsenical pump membrane protein BAC0031 Protein 5e-146 79
arsB YP_005195729.1 arsenical pump membrane protein BAC0574 Protein 2e-102 56
arsB YP_005195729.1 arsenical pump membrane protein BAC0575 Protein 9e-106 56