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Name : rfbB (PANA5342_2078) Accession : YP_005195508.1 Strain : Pantoea ananatis LMG 5342 Genome accession: NC_016816 Putative virulence/resistance : Virulence Product : nucleotide-diphosphate sugar epimerase Function : - COG functional category : - COG ID : - EC number : - Position : 2181008 - 2182015 bp Length : 1008 bp Strand : + Note : - DNA sequence : ATGAATTTTCTGGTAACCGGCGCAGCAGGCTTTATTGGCTTTCATGTCAGTCAACGCCTGCTGGCCGCCGGTCACCAGGT TGTCGGCCTTGACAACCTGAATGACTACTATGATGTAAACCTTAAACAAGCTCGCCTTGATATCATCGGTGACAATCCAT CCTTTACCTTTATTAAAGCCAATTTGGCCGATCGTCAGGCTATTGCCACACTTTTTGAACAGCACAATTTTCAGCGCGTT ATTCATCTGGCCGCTCAGGCAGGGGTGCGTTACTCACTCGAAAACCCCCATGCGTATGCCGATGCAAACGTCATTGGGCA CCTGAATATTCTTGAAGGCTGCCGCCACCATAAAATCGAGCATCTGCTTTATGCTTCATCCAGTTCGGTTTATGGCCTGA ATAACAAGATGCCATTTTCAACAGAAGACAGCGTCGATCATCCCGTGTCATTGTATGCCGCGACGAAAAAAGCCAATGAG CTGATGTCGCATACCTATTCACATCTCTATCAATTGCCTACTACTGGCTTACGTTTTTTCACGGTCTATGGCCCGTGGGG ACGTCCGGACATGGCGTTGTTTAAATTCACCCGCGCAATGCTTGCAGGCGAGGCGATAGATGTTTATAACCAGGGGCAAA TGAAGCGCGACTTTACTTATATCGATGATGTTGCAGAGGCGGTTATTCGCTTGCAGGATGTTATCCCGCAGGCGGACGCA GACTGGACCGTGGAAACGGGTTCTGCCGCGTCAAGCTCTGCCCCTTATCGCATATATAACCTTGGCAATAGCCAGCCGGT GAGTCTGATTCACTATATTGAAGCGATTGAGAAAGCGCTGGGTGTGAAGGCAAATAAAAATCTGATGCCCATGCAACCGG GGGACGTACTGGCAACCAGCGCGGACACAACCGCATTATTTAATACCATTGGATTTAAACCCCAAACCGGTGTTGATGAA GGCGTAAGGCGCTTTGTAGACTGGTATCGAAATTTCTATTCAATCTGA Protein sequence : MNFLVTGAAGFIGFHVSQRLLAAGHQVVGLDNLNDYYDVNLKQARLDIIGDNPSFTFIKANLADRQAIATLFEQHNFQRV IHLAAQAGVRYSLENPHAYADANVIGHLNILEGCRHHKIEHLLYASSSSVYGLNNKMPFSTEDSVDHPVSLYAATKKANE LMSHTYSHLYQLPTTGLRFFTVYGPWGRPDMALFKFTRAMLAGEAIDVYNQGQMKRDFTYIDDVAEAVIRLQDVIPQADA DWTVETGSAASSSAPYRIYNLGNSQPVSLIHYIEAIEKALGVKANKNLMPMQPGDVLATSADTTALFNTIGFKPQTGVDE GVRRFVDWYRNFYSI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cap1I | AAA64648.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 5e-99 | 56 |
