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Name : clpV (PANA5342_1742) Accession : YP_005195172.1 Strain : Pantoea ananatis LMG 5342 Genome accession: NC_016816 Putative virulence/resistance : Virulence Product : type VI secretion ATPase, ClpV1 family Function : - COG functional category : - COG ID : - EC number : - Position : 1844023 - 1846632 bp Length : 2610 bp Strand : + Note : - DNA sequence : ATGTCAGAGATCAGCCGTGCCGTGCTATTCGGCAAACTGGATACGCTGTTATTTACCTCGCTTGAGAGTGCGACCGCCTT TTGTAAACTGCGTGGCAACCCCTATGTTGAACTGGTGCACTGGTTGCATCAGCTCATGCAGCAGCAGGATGGCGATCTTC AGCAGGTGATTAAGCATTTTTCACTGGATGAAAACGCGCTGACGCGGGATATCGTCGCTGCACTGGACCGCCTGCCGCGC GGTGCGGGTGCGGTGTCCGATCTCGCAGAACACATCGACAGCGCCGTTGAGCGCGCCTGGGTTTATGCATCACTCAAATA CGGTGCTACCCGTATTCGCGGTGGTCACCTGCTGATAGGTATGCTGAAGACCTTTACGCTCGCCAGCGTCCTGAAAGGCA TTTCACCCCAGTTTTCACGCGTGAACGCCGATGCTTTACTGGAGCAGTTCGATACCTTGCTGGCGAACAGTAAAGAAGTT CAGCAGGCGCTGGTTCAGCCCGCAGGCGATGCTGCCGCCCCTCCGGCGGCGGGCGACAGCACGTTAGCGCAGTATGCGCA GGATCTGACCGCGCGAGCGCGCGACGGCAAGATCGACCCGGTTGCGGGCCGTGATGAAGAGATCCGCCAGATGGTGGATA TCCTGATGCGCCGTCGCCAGAACAATCCGTTACTCACCGGTGAAGCTGGCGTGGGTAAAACGGCAGTGGTAGAAGGGCTG GCGCTACGCATTGCCGCCGGTGATGTGCCGGCACCGCTGCGTGATGTGCAACTGTGGCTGCTGGACATTGGCATGTTGCA GGCCGGTGCAGGAATGAAAGGCGAGTTCGAAGCGCGTTTGCAGGCGCTGATCAATGAAGTGCAATCCAGCCCCACGCCGA TTGTGTTGTTCATTGATGAGATTCACACTCTGGTCGGCGCAGGCGGCCAGCAGGGCACAGGCGATGCCGCCAACCTGTTA AAACCGGCCCTGGCTCGCGGACAGTTGCGCACGATTGGCGCAACGACCTGGGCAGAATACAAGAAATACATCGAAAAAGA TCCTGCATTGACCCGCCGCTTCCAGACCGTTCAGGTGCAGGAGCCGGATGAAGCAAAAGCGATCCTGATGCTGCGCAGCA CCGTGAGCGCGCTTGAGAAACACCATCAGGTGCTGTTACTGGATGAAGCCGTCAGCGCCGCCGTTAAGCTCTCTCACCGT TACATTCCTGCCCGCCAGCTGCCGGATAAAGCCGTAGCCTTACTGGATACCGCCTGTGCACGCGTTGCCGTCAGCCAGGG CGCACAGCCTGCCGCGCTGGAAGACTGCCTGCACCGTCTGGCCGCGCTGGAAATCGAAGCGGAGATCGCCGAACGTGAAG TTAAAGTGGGGCTGGGTGATGAAACCCGCCAGGCCACGATTGCCGCCCAGCGCGCTGCCCTGGAAGCAGAGCGCGATGCG TTGGACGCCCGCTGGCAGCAGGAGCGTGAGCTGGTCGAACAGCTGATTGCCCTGCGCGCGCGTTGCGTGACCGAAGGGGA AACTTCCCTGCGCGAGCAGCTCGATGAAACCCGACAGAAGTTGCACGCGGTTCAGGGCGAAGCGCCGTTACTGTTTGCTG CCGTTGACGCCAGCGTCGTTGCCGCAGTGGTATCCGACTGGACCGGCATTCCGCTGGGCCGGATGGTGAAAAACGAAATT GACGCCGTGCTTAACCTCGCGGACACGCTGAATCAGCGCGTGATTGGGCAGCGTCACGGGCTGGATCTGATTGCCAAACG CGTTCGCACCTCACGCGCCCGACTGGACAATCCTAATAAACCGGTCGGTGTGTTTATGCTCTGTGGCCCGTCAGGCGTCG GGAAAACCGAAACCGCGCTGGCGCTGGCCGAATCGCTTTATGGTGGAGAGCAAAACATCATCACCATCAACATGAGCGAG TTCCAGGAAGCGCACACCGTTTCAACGCTGAAAGGGGCGCCTCCAGGCTATGTAGGTTACGGTGAAGGCGGTGTGCTGAC GGAGGCCGTGCGTCGTCGTCCTTACAGCGTCGTGCTGCTGGATGAGATTGAAAAAGCCCATCCTGATGTGCATGAGCTGT TTTTCCAGGTCTTCGACAAAGGCTGGATGGAAGATGGAGAAGGGCGCCACATTGATTTCCGCAATACCATTATCATCCTC ACCTCTAACGTCGGTACGCAACTGATCAGTGCGCTCTGTGCCGATCCGGAACTGATGCCGGATCCTGATGCGCTCAGCAC CGCTTTACGTAAACCCTTACTGGAGGTGTTCCCGCCAGCACTGCTGGGCCGTCTGCTGGTGGTGCCTTACTATCCCCTCA GTGACGAGATGCTGGCAGAGATTGTTAAGCTGCAACTGGGGCGCATTGTACGCCGCTTGGAAGAGAACCACGGTATTGAA GCCATTATTGACGATTCGGTCGTAAGCCAGATCGTGCAGCGTTGTACGGAAGTGGAGTCTGGAGGTCGCATGGTCGATGC CATCCTGACCAATACCCTGTTGCCGCAGATGAGCCAGATACTGCTCAGCGCCCATGCTCGTGATGAACGTTATCGTCGCG TGCAGGTCAGCTGTGATCAGGGCGAGTTTGTTTGCCAGTTTGCTGTCTAA Protein sequence : MSEISRAVLFGKLDTLLFTSLESATAFCKLRGNPYVELVHWLHQLMQQQDGDLQQVIKHFSLDENALTRDIVAALDRLPR GAGAVSDLAEHIDSAVERAWVYASLKYGATRIRGGHLLIGMLKTFTLASVLKGISPQFSRVNADALLEQFDTLLANSKEV QQALVQPAGDAAAPPAAGDSTLAQYAQDLTARARDGKIDPVAGRDEEIRQMVDILMRRRQNNPLLTGEAGVGKTAVVEGL ALRIAAGDVPAPLRDVQLWLLDIGMLQAGAGMKGEFEARLQALINEVQSSPTPIVLFIDEIHTLVGAGGQQGTGDAANLL KPALARGQLRTIGATTWAEYKKYIEKDPALTRRFQTVQVQEPDEAKAILMLRSTVSALEKHHQVLLLDEAVSAAVKLSHR YIPARQLPDKAVALLDTACARVAVSQGAQPAALEDCLHRLAALEIEAEIAEREVKVGLGDETRQATIAAQRAALEAERDA LDARWQQERELVEQLIALRARCVTEGETSLREQLDETRQKLHAVQGEAPLLFAAVDASVVAAVVSDWTGIPLGRMVKNEI DAVLNLADTLNQRVIGQRHGLDLIAKRVRTSRARLDNPNKPVGVFMLCGPSGVGKTETALALAESLYGGEQNIITINMSE FQEAHTVSTLKGAPPGYVGYGEGGVLTEAVRRRPYSVVLLDEIEKAHPDVHELFFQVFDKGWMEDGEGRHIDFRNTIIIL TSNVGTQLISALCADPELMPDPDALSTALRKPLLEVFPPALLGRLLVVPYYPLSDEMLAEIVKLQLGRIVRRLEENHGIE AIIDDSVVSQIVQRCTEVESGGRMVDAILTNTLLPQMSQILLSAHARDERYRRVQVSCDQGEFVCQFAV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 0.0 | 55 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpV | YP_005195172.1 | type VI secretion ATPase, ClpV1 family | VFG2076 | Protein | 0.0 | 60 |
| clpV | YP_005195172.1 | type VI secretion ATPase, ClpV1 family | VFG2084 | Protein | 7e-136 | 43 |
