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Name : PANA5342_1740 (PANA5342_1740) Accession : YP_005195170.1 Strain : Pantoea ananatis LMG 5342 Genome accession: NC_016816 Putative virulence/resistance : Virulence Product : type VI secretion system, core protein Function : - COG functional category : - COG ID : - EC number : - Position : 1841046 - 1842923 bp Length : 1878 bp Strand : + Note : - DNA sequence : ATGGACAGCAAGCTGCTTGATTACTACAACCGTGAACTGGCCTATCTGCGCGAGATGGGCGCGGAGTTTGCTGCCCAGTA TCCCAAGGTCGCCGGGCGGCTTGGTATGCGCGGCATTGACGTCGCCGATCCTTACGTCGAAAGACTTATGGAGGGTTTCG CATTTCTGACGTCACGCGTGCAGTTAAAGATGGATGCCGAGTTTCCACGCTTTTCTCAGCGGATGCTGGAAATGGTGGCA CCGGGCTACCTTTCACCTACGCCGTCGATGGCCATCGCCCAGCTCACGCCGGACAGCCGCAAAGGCGATATCAGCAACGG TTTCTTAGTGCCGCGCGGCACAATGATGGAAAGCCAGAACCTGAAAAAAACGGGCGTCACCTGCAGCTATACCACCGCGC ACGATGTGATGTTACAGCCCCTGCGTATCAGCGATGTGTCGTTAGGTGGCGTGCCAGCGGATATCCCGTTAGGCGAGTTG AAAGCGGGCGGCTCGACGGCGGCGTCCAGCGCCCTCCGTATCCGCATCACCTGCGAAGGCATTTCATCGTTAAGCCAGCT CAGTCTCGATGACGTGATGTTTTTCCTGAGCGGACCCGATATCCAGGCCCTGAAACTGATGGAGCTGCTGATGCAGCATC GTGTCGGAATCATCCTGCAGTCCGTGGAAGCAAAACCGCAACGTCAGGTTCTGCCGGATGACGCGCTTCAACAGGAAGGC TTTTCGACCGAGCAGGCCCTGCTGCCCGACGATCTGCGTAATTTTGACGGCTACCGCCTGCTGCAGGAGTATTTTGCATT CCCGGCACGCTTCCAGTTTATCAGCCTGCGTCAGCTGGCGCCTTTCCTGCAGCGCTGCGATAACGCCCTGTCGTTTGATA TCGTCATCCTGCTGGATAAGGCCGATGCGGCGCTGGAAAGCGTTGTCGACAGCGCCCATCTGGCCCTGCACTGCACGCCG GTCATTAACCTGTTCCCGAAAACCGCCGAGCGGCTTAAGGTCAGCGACAGTCAGCACGAGTATCACCTGGTGGTCGATAA CATTCGTCCGCTGGACTATGAGATCCATTCGGTGAAGCGCTTGTTCGCCTCTGTCGAAGGGCAGCGCGAAGAGCAGATCT TCCGGCCGTTCTGGAGCACCTTCAGCCATGACGGCGGGGATTATGGCGCGTATTTCTCCCTGCGTCGTGAACAGCGCACG CTCTCTGAGCACGCGTTGCGCTATGGCACCCGAACGGGCTATATCGGTTCTGAAGTGTTTCTCTCCTTGGTGGATCAAAA TCATACACCGTGGAACAGCGATATCCGCTATTTGTCTGCGGAAGTGATGTGCACCAGCCGTGACCTGCCTTTGATGCTGC TACAGCAAGAGCAGGCCAACTTTGTAATGCCGGATTCCATTCCTGTCGGGCAACTTAAATTGTGCAAAGGCCCGACGCCA CCGCGTCCGGCGCTGGCTGAAGGGCTTTCAGCATGGCGACTCATCAGTCATCTGCAGATGAACTATCTAAGCCTGATGGA CAGCAGCGATGGCGAAGGGGCTGCGGCACTGCGCCAGATGCTGAGCCTGTATGCCAGCCTGGCCGAAACGCCGCTAACGC GTCAGATTGACGGAATTCGGCACTGCAACCTCAAAGCCGTTCACCGCCGGGTGCCCGAGCCGGGCCCCGTGGTGTTTGCG CGCGGGGTCAGCATTGCGCTTGAGGTGGATGAGCAGGCGTTTTCAGGTGCCAGCCCCTGGCTGTTCGGCAGCGTGCTGGA GCGGGTCTTTTCTCGCCTTGTGGCGCTTAACAGCTTTACCGAATTCACCCTGAGCAGCCAGCAGCGCGGCGAAGTGGGCT ACTGGCCGCCGCGCATGGGCAAAAAGGCGCTGCTATGA Protein sequence : MDSKLLDYYNRELAYLREMGAEFAAQYPKVAGRLGMRGIDVADPYVERLMEGFAFLTSRVQLKMDAEFPRFSQRMLEMVA PGYLSPTPSMAIAQLTPDSRKGDISNGFLVPRGTMMESQNLKKTGVTCSYTTAHDVMLQPLRISDVSLGGVPADIPLGEL KAGGSTAASSALRIRITCEGISSLSQLSLDDVMFFLSGPDIQALKLMELLMQHRVGIILQSVEAKPQRQVLPDDALQQEG FSTEQALLPDDLRNFDGYRLLQEYFAFPARFQFISLRQLAPFLQRCDNALSFDIVILLDKADAALESVVDSAHLALHCTP VINLFPKTAERLKVSDSQHEYHLVVDNIRPLDYEIHSVKRLFASVEGQREEQIFRPFWSTFSHDGGDYGAYFSLRREQRT LSEHALRYGTRTGYIGSEVFLSLVDQNHTPWNSDIRYLSAEVMCTSRDLPLMLLQQEQANFVMPDSIPVGQLKLCKGPTP PRPALAEGLSAWRLISHLQMNYLSLMDSSDGEGAAALRQMLSLYASLAETPLTRQIDGIRHCNLKAVHRRVPEPGPVVFA RGVSIALEVDEQAFSGASPWLFGSVLERVFSRLVALNSFTEFTLSSQQRGEVGYWPPRMGKKALL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0289 | NP_454871.1 | hypothetical protein | Not tested | SPI-6 | Protein | 2e-122 | 45 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| PANA5342_1740 | YP_005195170.1 | type VI secretion system, core protein | VFG2074 | Protein | 1e-132 | 45 |
