|
Name : gabD3 (PANA5342_1675) Accession : YP_005195105.1 Strain : Pantoea ananatis LMG 5342 Genome accession: NC_016816 Putative virulence/resistance : Unknown Product : succinate-semialdehyde dehydrogenase [NADP+] GabD Function : - COG functional category : - COG ID : - EC number : - Position : 1769451 - 1770908 bp Length : 1458 bp Strand : + Note : - DNA sequence : ATGTCACGTATACAACTAAAAGATCACACGCTGTTGCGTCAGCAGGCGCTGTTTGCGGGTCAATGGCAGAACGGTTATCA GGGCGAAACGCTGCCGGTTATCGATCCGGCAACCGGTGAGACGCTGGCGACGGTTCCGGCGCTGGGGCGGAAAGAAACCG AGGCGGCGATCGATCATGCGGAGTCGGTACGCCATGACTGGGCCAAAACACCCAATGCCACACGCGCCGCACTGCTGGAA AAGTGGTATCAGTTGATTGTCGATAACGCCGACGATCTTGCCATCATCATGACGGCCGAGCAGGGCAAACCGCTGGCGGA AGCCAGAGGCGAAGTCCTGTACGGTGCCAGTTTCGTTAAGTGGTTTGCCGAAGAGGCGCGTCGCATTTACGGCGATACCA TTCCCGCGCCCACGTCCGACCGCAGAATCATCGTGTTAAAACAGCCGGTCGGCGTAGCGGCAGCCATTACGCCGTGGAAT TTTCCCATTGCCATGATTACCCGCAAGGTGGCGCCTGCGCTGGCGGCGGGTTGTCCGATTATCGTTAAACCTTCTGACCT GACGCCGCTGTCTGCCCTGGCGCTGGCGGTTCTGGCAGAGCGCGCCGGCTTTCCGTCCGGTGTTTTGCAGGTGGTCACCG GTATGCCGACGGAAATTGGCGCCGCACTGACCGAAAGCCGCCTGGTGCGTAAAATTTCATTCACCGGCTCAACCCGTGTG GGTCAGTTACTGATGAAACAATGTGCCGACAGCGTAAAACGGTTGAGTCTGGAACTGGGCGGCAACGCGCCGTTAATCGT TTTCGATGACGCCGATATTGAGATCGCGGTGGCTGGCGTCATGACCAGCAAATTCCGTAACGCCGGGCAAACCTGTGTCT GCGCCAACCGGATTCTGGTACAGCGCAACATCTATGAACGCTTTTCCGCCCGCTTACTGGAAGCCGTGGCCACCCTCAAG GTGGGCGACGGATTTGCGGCCGGTAGCACCCTCGGGCCCCTGATCAATACCGCCGCGGTTGAAAAGGTCAATGCACATAT CGACGATGCCTTACAGAAAGGGGCGACGCTGTTAACGGGCGGCATCAGTAGCGGAGCGGGAACCTGGGTTCAGCCTACCG TTCTGGGGCTGGTGACGAGTCAGATGCGCATTGCGCAGGAAGAGACCTTTGGCCCGGTGGCACCACTGTTTGTGTTTGAC GATGAGGCGCAGGCATTGGCGATGGCGAACGACACGCCTTATGGCCTGGGCGCGTATTTCTTCACGGAGAATATTCGGCG CGCCTGGCGGGTAGCGGAAGCGCTGGAATTTGGCATGGTAGGATTTAATACGGGCGTAATCTCTTTAGAAGTGGCGCCCT TTGGCGGCGTTAAATTATCGGGAATCGGTCGTGAAGGTTCACGTTACGGAATTGATGAATATCTGGAACAAAAAACATTC CATCTCGGCAGTTTGTAA Protein sequence : MSRIQLKDHTLLRQQALFAGQWQNGYQGETLPVIDPATGETLATVPALGRKETEAAIDHAESVRHDWAKTPNATRAALLE KWYQLIVDNADDLAIIMTAEQGKPLAEARGEVLYGASFVKWFAEEARRIYGDTIPAPTSDRRIIVLKQPVGVAAAITPWN FPIAMITRKVAPALAAGCPIIVKPSDLTPLSALALAVLAERAGFPSGVLQVVTGMPTEIGAALTESRLVRKISFTGSTRV GQLLMKQCADSVKRLSLELGGNAPLIVFDDADIEIAVAGVMTSKFRNAGQTCVCANRILVQRNIYERFSARLLEAVATLK VGDGFAAGSTLGPLINTAAVEKVNAHIDDALQKGATLLTGGISSGAGTWVQPTVLGLVTSQMRIAQEETFGPVAPLFVFD DEAQALAMANDTPYGLGAYFFTENIRRAWRVAEALEFGMVGFNTGVISLEVAPFGGVKLSGIGREGSRYGIDEYLEQKTF HLGSL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 4e-133 | 59 |
| cur_1509 | YP_001800903.1 | NAD-dependent aldehyde dehydrogenase | Not tested | Not named | Protein | 1e-91 | 45 |
