Gene Information

Name : yejF (PANA5342_1503)
Accession : YP_005194933.1
Strain : Pantoea ananatis LMG 5342
Genome accession: NC_016816
Putative virulence/resistance : Unknown
Product : ABC transporter
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1581255 - 1582859 bp
Length : 1605 bp
Strand : -
Note : -

DNA sequence :
ATGAGCACCCCGCTGCTTGCTGTTAACCATCTCTCCATCGCCTTTCGTCAGGGCAAACAGCTGTATCAGGTGGTGGACGA
TGTCTCGCTGCGTATAGAGGCAGGAGAAACCCTGGCCCTGGTGGGCGAATCCGGTTCCGGAAAAAGCGTTACCGCCCTGT
CGATCATGCGGCTGCTGCACGCGTCCGCCGTCGCCTATCCTCAGGGCGAAATTCTGCTGGCAGGCGAAGACCTGCTCAAG
GCATCGGCGCAGCGACTCCGCGGCCTGCGGGGTAATCAGATGGCGATGATTTTTCAGGAACCCATGGTGTCACTCAACCC
TTTGCACAGTATTGAAAAGCAGCTATATGAAGTGCTTTCTCTACATCGCGGCATGCGACGCGAGCCCGCGCGAGCGGAAA
TCCTGCGCTGTCTCGATCGCGTGGGTATTCGCCAGCCGGCCTCTCGCCTGAACGCTTTTCCACATCAGCTCTCCGGGGGC
GAGCGCCAGCGTGTGATGATCGCGATGGCCCTGCTGACCCAGCCGAGGCTGCTGATTGCCGATGAACCGACCACCGCGCT
TGATGTCACCGTTCAGGCGCAGATCCTTGGCCTGCTGCGCGAACTGCAACAGGAACTGAATATGGGCATGCTGTTTATTA
CCCATAACCTGAAGATTGTTCGCCAACTGGCAGACAGCGTCAGCGTGATGCGCTCTGGTCGGGTGGTTGAGCATAACGCC
GGCCAGCGCCTGCTAACACAGCCTCAGCACGCCTACACGAAACAGCTGCTGGCAGCCGATCCGGAAGGTCGTGCCGTGCC
GCTCCCTGCGGATACGCCGGTTATTCTTAAGGTGGACAACCTGCGCGTCAGTTTTCCCCTGCGTCAGGGCCTGTTTAAAC
GTAAAACAGGCGAAAAAATTGCAGTAGAGAATCTTAGCTTTAGCCTGAAACGAGGCGAAAGTCTGGGATTAGTAGGCGAG
TCAGGCTCAGGTAAAAGCACCACCGGTATGGCGTTGTTGCGTCTTATTGCCGCTCAGGGGGAGGTCTGGTTTGACAATCA
GCCGCTGCATCAGCTGTCGAGAAAAGCGCTGTTGCCGCTGCGTCGCCGCATTCAGGTCGTTTTTCAGGATCCTAATTCTG
CGCTGAATCCCCGAATGACGGTTCAGCAGATCGTTGCCGAAGGTCTGGCTGTGCATTATCCACACCTGAGTGCCGCACAA
CAGGACGAACGGGTTAAAGCGGTCATGACCGAGGTCGGGCTGGACGCGGAAAGCCGCCATCGCTATCCAACTGCGTTTTC
CGGCGGTCAGCGTCAGCGAATCGCTATTGCGCGCGCCCTGATTCTTGAACCGGAGCTGCTGATACTGGATGAGCCAACCT
CCTCACTCGACCGCTCCGTACAAAAACAGATTCTGACGCTGCTACGGGGATTACAGCAGCAGCGTCAGCTGAGTTATCTG
TTTATCAGTCACGATTTGGAAGTGGTGCGCTCGCTCTGCCATCAGCTCATCGTACTGCGTCAGGGCGAGGTCGTTGAACA
AGGCGACTGTGAGACACTCTTTGCCACACCTGCACAGGCTTATACCCGCGAGCTGCTCGGCTCCGTTTCGCTCAGTGACC
GATGA

Protein sequence :
MSTPLLAVNHLSIAFRQGKQLYQVVDDVSLRIEAGETLALVGESGSGKSVTALSIMRLLHASAVAYPQGEILLAGEDLLK
ASAQRLRGLRGNQMAMIFQEPMVSLNPLHSIEKQLYEVLSLHRGMRREPARAEILRCLDRVGIRQPASRLNAFPHQLSGG
ERQRVMIAMALLTQPRLLIADEPTTALDVTVQAQILGLLRELQQELNMGMLFITHNLKIVRQLADSVSVMRSGRVVEHNA
GQRLLTQPQHAYTKQLLAADPEGRAVPLPADTPVILKVDNLRVSFPLRQGLFKRKTGEKIAVENLSFSLKRGESLGLVGE
SGSGKSTTGMALLRLIAAQGEVWFDNQPLHQLSRKALLPLRRRIQVVFQDPNSALNPRMTVQQIVAEGLAVHYPHLSAAQ
QDERVKAVMTEVGLDAESRHRYPTAFSGGQRQRIAIARALILEPELLILDEPTSSLDRSVQKQILTLLRGLQQQRQLSYL
FISHDLEVVRSLCHQLIVLRQGEVVEQGDCETLFATPAQAYTRELLGSVSLSDR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cpfrc_01561 YP_003783961.1 hypothetical protein Not tested PiCp 6 Protein 7e-63 41
oppDF2 YP_005686002.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 7e-63 41
oppDF2 YP_005681814.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 7e-63 41
oppDF2 YP_005683914.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 7e-63 41
dppD YP_005160017.1 putative peptide ABC transport system ATP-binding protein Not tested Not named Protein 8e-71 41