Gene Information

Name : rph (PANA5342_0125)
Accession : YP_005193555.1
Strain : Pantoea ananatis LMG 5342
Genome accession: NC_016816
Putative virulence/resistance : Unknown
Product : ribonuclease PH
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 142418 - 143134 bp
Length : 717 bp
Strand : +
Note : -

DNA sequence :
ATGCGTCCAGCAGGCCGTAGCGCACATCAGGTGCGTCCAGTCACATTGACCCGCAATTACACTAAACACGCAGAAGGTTC
CGTTCTGGTGGAATTCGGTGAAACCAAAGTGCTCTGCACTGCCACGGTGGATGAAGGTGTTCCGCGCTTCCTCAAAGGAC
AGGGACAGGGCTGGGTCACTGCCGAATATGGCATGTTGCCGCGTTCAACGCATAGCCGCATGGCACGTGAAGCCGCGAAG
GGCAAACAGGGCGGCCGCACGCTGGAAATTCAGCGTCTGATCGCCCGTTCACTCCGCGCAGCCGTCGATCTTAAAGTGCT
GGGTGAATATACCATTACGCTTGATTGCGACGTCATCCAGGCTGATGGTGGCACCCGTACCGCATCTATCACCGGCGCCT
GCGTGGCACTGGCGGATGCACTAAACAAACTGGTTGCCAGCGGTAAGCTCAAAGCGAACCCGATGAAAGGGATGGTCGCG
GCGGTATCTGTGGGCATCGTTAACGGTGAAGCCCTGTGTGACCTTGAATATGTTGAAGACTCCGCTGCTGAAACCGATAT
GAACGTCGTGATGATGGAAGACGGCCGTATGATCGAGGTGCAGGGCACGGCGGAAGGCGAACCTTTCAGCCATGAAGAGT
TGCTGGCACTGCTGGCGCTGGCCCGCGGCGGCATCGAAGAGTTAATTCAGGCGCAAAAAGCGGCGTTGGAAAAATAA

Protein sequence :
MRPAGRSAHQVRPVTLTRNYTKHAEGSVLVEFGETKVLCTATVDEGVPRFLKGQGQGWVTAEYGMLPRSTHSRMAREAAK
GKQGGRTLEIQRLIARSLRAAVDLKVLGEYTITLDCDVIQADGGTRTASITGACVALADALNKLVASGKLKANPMKGMVA
AVSVGIVNGEALCDLEYVEDSAAETDMNVVMMEDGRMIEVQGTAEGEPFSHEELLALLALARGGIEELIQAQKAALEK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rph YP_001800860.1 ribonuclease PH Not tested Not named Protein 2e-60 58