Gene Information

Name : PANA5342_1115 (PANA5342_1115)
Accession : YP_005194545.1
Strain : Pantoea ananatis LMG 5342
Genome accession: NC_016816
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1151833 - 1152282 bp
Length : 450 bp
Strand : -
Note : -

DNA sequence : 
ATGAAGAAGCTGAAAGGCGTTATCTCAGTTTTTGCTCTGAGCCTTTGTCTGCTTTCACCGGCTCAGGCCGAAGAACAGCG
TTACATCAGTATCCGCAACACAGACATGGTCTGGGTGCCGGGCAATGTCTGCGTGTGGCAGTTTCGTCTGGATAACGGCG
GAAGTGGTGAGGGGTTCGGGCCTCTGACGCTCTCCCTGCGTCTGAAAGACAAAGGCGGAAACACGCTGGTTATGGGGAAT
ATGGCGGTGGCTGCATTTGGTGAGAGCGATGCGACTCGCTCTCAGGAAGCCTCGCTGGAGAACGAATGCGTGGAAAACGT
CAGCTCTGTCGAAATCATGAAGGCAACGGAAGAGCGTAATGGTTACCAGATTGACCTGCCACTGTCTGTTTTCGACCCGC
AGTATTACCAACCGCTGCAAGTCACGGTTGTCGGAGGTAAGGCGTCTTAG

Protein sequence : 
MKKLKGVISVFALSLCLLSPAQAEEQRYISIRNTDMVWVPGNVCVWQFRLDNGGSGEGFGPLTLSLRLKDKGGNTLVMGN
MAVAAFGESDATRSQEASLENECVENVSSVEIMKATEERNGYQIDLPLSVFDPQYYQPLQVTVVGGKAS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAK00476.1 unknown Not tested SHI-1 Protein 1e-33 61
S3197 NP_838481.1 hypothetical protein Not tested SHI-1 Protein 1e-33 61
SF2993 NP_708767.1 hypothetical protein Not tested SHI-1 Protein 1e-33 61
unnamed AAW51752.1 Aec69 Not tested AGI-3 Protein 3e-33 60
unnamed ADD91706.1 hypothetical conserved protein Not tested PAI-I AL862 Protein 3e-33 60

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PANA5342_1115 YP_005194545.1 hypothetical protein VFG0657 Protein 3e-34 61