Gene Information

Name : klcA (PANA5342_1113)
Accession : YP_005194543.1
Strain : Pantoea ananatis LMG 5342
Genome accession: NC_016816
Putative virulence/resistance : Virulence
Product : antirestriction protein KlcA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1150137 - 1150580 bp
Length : 444 bp
Strand : -
Note : -

DNA sequence :
ATGGATACACACAACCCTGAGTTCGCTGAGCAGGCAGCAATTACTGCCTCGGTGGTCCCTGACGAGCTACGCATCGACTT
CTGGCCGCAGCACTTTGGCTCCATCCCGCAATGGATAACCCTTGCGCCCAGAATTTTTGCCTGGATGGACCGCCTGTGTA
TCGATTATCACGGTGGTATCTGGCGCTTTTCGACGCTCAGCAACGGCGGCGCTTTTATGGCTCCTGAGACAGAGCAGGAC
GAGACTTGGACATTGTTCAACAGTATGAATGGTAACGGCGCGGAACTTACTGGTGAAGCTGCAGGGATAGTCGCCTGTCT
GATGGTATACAGCCATCATGCCTGCCGTACCGAATGTGACGCGATGACAGAGCACTATTATCGCTTACGCGACTTCGCGT
TAAACCATCCAGAGTGCAGTGCCATTATGTATCTAATCGACTAA

Protein sequence :
MDTHNPEFAEQAAITASVVPDELRIDFWPQHFGSIPQWITLAPRIFAWMDRLCIDYHGGIWRFSTLSNGGAFMAPETEQD
ETWTLFNSMNGNGAELTGEAAGIVACLMVYSHHACRTECDAMTEHYYRLRDFALNHPECSAIMYLID

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL67346.1 intergenic-region protein Not tested PAI II CFT073 Protein 3e-43 73
unnamed CAI43899.1 hypothetical protein Not tested LEE Protein 2e-43 73
SF2995 NP_708769.2 hypothetical protein Not tested SHI-1 Protein 3e-43 71
S3200 NP_838483.1 hypothetical protein Not tested SHI-1 Protein 3e-43 71
yfjX ADD91703.1 YfjX Not tested PAI-I AL862 Protein 4e-46 71
Z1216 NP_286751.1 hypothetical protein Not tested TAI Protein 2e-43 71
z1216 CAD33786.1 Z1216 protein Not tested PAI I 536 Protein 1e-46 71
Z1656 NP_287159.1 hypothetical protein Not tested TAI Protein 2e-43 71
unnamed CAD66202.1 hypothetical protein Not tested PAI III 536 Protein 7e-47 71
unnamed CAI43844.1 hypothetical protein Not tested LEE Protein 3e-47 71
aec72 AAW51755.1 Aec72 Not tested AGI-3 Protein 7e-46 70
yfjX CAE85200.1 YfjX protein Not tested PAI V 536 Protein 2e-42 70
ECO103_3588 YP_003223445.1 hypothetical protein Not tested LEE Protein 2e-42 70
unnamed CAD42097.1 hypothetical protein Not tested PAI II 536 Protein 3e-45 70
ORF_48 AAZ04457.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 2e-43 69
yfjX YP_854322.1 hypothetical protein Not tested PAI I APEC-O1 Protein 4e-43 69
c5155 NP_757003.1 hypothetical protein Not tested PAI II CFT073 Protein 4e-43 69

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
klcA YP_005194543.1 antirestriction protein KlcA VFG0659 Protein 9e-44 71
klcA YP_005194543.1 antirestriction protein KlcA VFG1527 Protein 6e-47 71
klcA YP_005194543.1 antirestriction protein KlcA VFG1677 Protein 3e-47 71
klcA YP_005194543.1 antirestriction protein KlcA VFG1616 Protein 1e-45 70