Gene Information

Name : PANA5342_1111 (PANA5342_1111)
Accession : YP_005194541.1
Strain : Pantoea ananatis LMG 5342
Genome accession: NC_016816
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1149364 - 1149585 bp
Length : 222 bp
Strand : -
Note : -

DNA sequence :
ATGAAAATCATCAGCAAACGCCAGGCCATGGCTCTGTACCAGCAACATCCTGGCTCCCGACTGTTTCGCTTCAGTACGGG
CAAATATAAATGGTCAGGCAGTATCTGCCATTATGCTGGCCGCGAGGTGGAGGACATACGCGGCGTTCTGGCCGTGTTTG
CTGAACGTCGTCAGGACCGCAATGGTCCCTATGTCATTCTTCGAAGCGTCACTCTCAATTAA

Protein sequence :
MKIISKRQAMALYQQHPGSRLFRFSTGKYKWSGSICHYAGREVEDIRGVLAVFAERRQDRNGPYVILRSVTLN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL67344.1 intergenic-region protein Not tested PAI II CFT073 Protein 5e-19 69
yeeT AAK16199.1 YeeT Not tested PAI-I AL862 Protein 5e-19 69
c5151 NP_756999.1 hypothetical protein Not tested PAI II CFT073 Protein 8e-19 69
unnamed AAK00480.1 unknown Not tested SHI-1 Protein 7e-16 69
yeeT CAD33788.1 YeeT protein Not tested PAI I 536 Protein 9e-19 69
yeeT ADD91701.1 YeeT Not tested PAI-I AL862 Protein 7e-19 69
yeeT AAZ04459.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 5e-19 69
yeeT CAE85202.1 YeeT protein Not tested PAI V 536 Protein 2e-18 68
yeeT NP_838485.1 hypothetical protein Not tested SHI-1 Protein 2e-18 68
unnamed CAD66204.1 hypothetical protein Not tested PAI III 536 Protein 1e-18 68
yeeT NP_708771.1 hypothetical protein Not tested SHI-1 Protein 2e-18 68
yeeT CAD42099.1 hypothetical protein Not tested PAI II 536 Protein 1e-18 68
Z1218 NP_286753.1 hypothetical protein Not tested TAI Protein 1e-18 68
unnamed CAI43847.1 hypothetical protein Not tested LEE Protein 1e-18 68
unnamed AAL08476.1 unknown Not tested SRL Protein 1e-18 68
aec74 AAW51757.1 Aec74 Not tested AGI-3 Protein 2e-18 66
ECO103_3590 YP_003223447.1 hypothetical protein Not tested LEE Protein 5e-18 66
unnamed AAL57578.1 unknown Not tested LEE Protein 4e-16 65
unnamed CAI43902.1 hypothetical protein Not tested LEE Protein 4e-16 65

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PANA5342_1111 YP_005194541.1 hypothetical protein VFG1529 Protein 3e-19 69
PANA5342_1111 YP_005194541.1 hypothetical protein VFG1679 Protein 6e-19 68
PANA5342_1111 YP_005194541.1 hypothetical protein VFG0661 Protein 5e-19 68
PANA5342_1111 YP_005194541.1 hypothetical protein VFG1618 Protein 5e-19 68
PANA5342_1111 YP_005194541.1 hypothetical protein VFG1067 Protein 4e-19 68