Gene Information

Name : nrdE (PANA5342_1045)
Accession : YP_005194475.1
Strain : Pantoea ananatis LMG 5342
Genome accession: NC_016816
Putative virulence/resistance : Unknown
Product : ribonucleotide-diphosphate reductase subunit alpha
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1083313 - 1085451 bp
Length : 2139 bp
Strand : -
Note : -

DNA sequence :
TTGGCAACGACAGATACCCTCAACGACGTAGCGCTGGATTACCATGCGCTGAACGCCATGCTGAACCTGTATGACGCTGA
CGGCCGTATCCAGTTTGACAAGGATCAGCAGGCCGCACGTCAGTTTGTTATTCAGCACGTGCAGCCCAACACCCAGCACT
TTACCAGCATCGCCGAGCGCCTGCGCTATCTGGTCGCCGAAGGCTACTACGAAGCTTCCGTACTTAATCAGTATGATTTT
AACTTTGTCTGCGGACTGCACGACGAAGCCGATGCATGGGGCTTTGCGTTCAAGACCTTTTTGGGTGCGTGGAAGTACTA
CACCAGCTACACCCTGAAAAGTTTTGATGGCAAGCGTTACCTGGAAACCTTCGAGCAGCGTGCCTGTATGGTGGCGCTGA
CGCTGGCACAGGGCGATGAAACCCTGGCGCGCTCGGTGCTGGAAGCCATCCTGAGTGGGCGTTTTCAGCCCGCCACGCCG
ACGTTTCTGAACAGCGGCAAGCAACAGCGCGGCGAACTGGTTTCCTGCTTCCTGCTGCGCATTGAAGACAACATGGAGTC
GATTGGCCGGGCCGTGAACTCTGCGCTCCAGCTGTCAAAACGCGGCGGCGGCGTAGCGTTTCTGCTGTCGAACCTGCGTG
AGTCCGGCGCGCCGATCAAGCGCATTGAAAACCAGTCTTCCGGCGTTATTCCGGTGATGAAAATGCTGGAGGATGCGTTT
TCTTATGCTAACCAGCTCGGCGCGCGTCAGGGAGCCGGCGCAGTCTGGCTGAATGCTCACCATCCGGATATTTTGCGCTT
CCTGGATACCAAGCGCGAAAACGCCGATGAAAAAATCCGCATTAAAACGCTGTCGCTGGGCGTGGTCATTCCGGATATCA
CCTTCCAGCTTGCCAAAGAGAATCAGCCGATGGCGCTGTTCTCGCCCTACGATGTTGAAAGAATCTACGGTCAGGCGTTT
GGCGATATTAGCATCAGCGAGAAATACGCGGAGATGCTGGCGGACGACAGAATCCGTAAAACCTATATTCAGCCGCGCGA
TTTCTTTCAGACGCTGGCGGAAATCCAGTTCGAATCAGGCTATCCCTACATCATGTATGAGGACAGCGTAAACCGGGACA
ACCCGATTGCCGGTCGCATCAATATGAGCAACCTCTGCTCAGAGATTTTGCAGGTGAACAGCGCCAGCGAATTCAACGAG
GATCTCAGCTACCGCCGCATGGGCAAAGATATCTCCTGTAACCTTGGCTCGCTGAATATCGCCCATGCGATGGATTCTGG
CGATCTGGCCCACACGGTGGAAACGGCAATTCGGGCGCTGACTGCGGTGTCAGATATGAGTGACATTGGCTCGGTTCCCT
CCGTTGCGGAAGGCAATCGCCGCTCGCATGCTATCGGTCTGGGTCAGATGAACCTGCATGGTTACCTGGCCCGTGAAGGC
ATTGCTTACGGATCACCCGAGGCGCTGGATTTCACCAATCTCTATTTTTACTGTGTGACTTATTATGCCCTGCGTGCCTC
GAATCAGCTGGCAAAAGAGCGCCAGCAGACTTTCGACGGTTTTAGCGCCTCAACCTATGCCACCGGCGCGTATTTTGACA
AATATCTGCAAAGCGACTGGCAGCCGCGAACCGCCCGCATCGCCGCCCTGTTTGCCGATGCGGGCATCAGCTTGCCCTGT
CACAACGACTGGCTGGCACTGCGTGAATCGGTGATGGCCTCGGGGCTGTATAATCAAAACCTGCAGGCGATACCGCCTAC
CGGATCGATCTCCTATATCAACCACGCCACGTCCAGTATTCATCCGATTGTGTCGCGAATAGAGATCCGCAAAGAGGGCA
AAACCGGTCGCGTTTACTATCCGGCTCCCTTCATGACCAACGACAATCTGGAACTCTATCAGGACGCTTACCAGATTGGG
CCGGAAGCCATTATTGATACCTACGCAGAGGCGACCCGACATGTGGATCAGGGCCTGTCATTAACCCTGTTTTTCCGGGA
TGACGTGACCACGCGCGACATTAATAAAGCGCAGATTTACGCCTGGAAGAAAGGGATTAAAACACTTTACTACATTCGAC
TGCGCCAGATGGCCCTGCAAGGCACTGAAATTCAGGGCTGCGTCTCCTGCGCACTGTGA

Protein sequence :
MATTDTLNDVALDYHALNAMLNLYDADGRIQFDKDQQAARQFVIQHVQPNTQHFTSIAERLRYLVAEGYYEASVLNQYDF
NFVCGLHDEADAWGFAFKTFLGAWKYYTSYTLKSFDGKRYLETFEQRACMVALTLAQGDETLARSVLEAILSGRFQPATP
TFLNSGKQQRGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLRESGAPIKRIENQSSGVIPVMKMLEDAF
SYANQLGARQGAGAVWLNAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFQLAKENQPMALFSPYDVERIYGQAF
GDISISEKYAEMLADDRIRKTYIQPRDFFQTLAEIQFESGYPYIMYEDSVNRDNPIAGRINMSNLCSEILQVNSASEFNE
DLSYRRMGKDISCNLGSLNIAHAMDSGDLAHTVETAIRALTAVSDMSDIGSVPSVAEGNRRSHAIGLGQMNLHGYLAREG
IAYGSPEALDFTNLYFYCVTYYALRASNQLAKERQQTFDGFSASTYATGAYFDKYLQSDWQPRTARIAALFADAGISLPC
HNDWLALRESVMASGLYNQNLQAIPPTGSISYINHATSSIHPIVSRIEIRKEGKTGRVYYPAPFMTNDNLELYQDAYQIG
PEAIIDTYAEATRHVDQGLSLTLFFRDDVTTRDINKAQIYAWKKGIKTLYYIRLRQMALQGTEIQGCVSCAL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1481 YP_001800875.1 ribonucleotide-diphosphate reductase subunit alpha Not tested Not named Protein 0.0 71