Gene Information

Name : glnA (PANA5342_0102)
Accession : YP_005193532.1
Strain : Pantoea ananatis LMG 5342
Genome accession: NC_016816
Putative virulence/resistance : Virulence
Product : glutamine synthetase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 114935 - 116344 bp
Length : 1410 bp
Strand : -
Note : -

DNA sequence :
ATGTCCGCTGAACACGTTCTCTCGATGATGAACGAGCATGAAGTTAAGTTTGTTGACCTGCGTTTTACCGATACCAAAGG
TAAAGAACAGCACGTTACTATTCCGGCTCACCAGGTTAACGCTGACTTCTTCGAAGAAGGCAAGATGTTCGATGGCTCTT
CCATCGGCGGCTGGAAAGGCATTAACGAATCAGACATGGTGCTGATGCCGGATGCAACCACGGCGGTAATGGATCCTTTC
TTTGAAGATTCTACCCTGATCATTCGTTGCGACATTCTTGAGCCAGGCACCATGCAGGGCTATGACCGCGATCCACGTTC
TATCGCTAAGCGCGCGGAAGATTACCTGCGTTCTTCAGGCATTGCGGATACCGTTCTGTTTGGCCCAGAGCCAGAGTTCT
TCCTGTTTGACGATATTCGTTTTGGTTCTTCAACTTCGGGTTCTCATGTTGCTATCGACGATATCGAAGCAGCCTGGAAC
ACCGGCAAAGAATACGAAGGCGGCAACAAAGGCCACCGTCCAGGCCTGAAAGGTGGTTACTTCCCGGTTCCACCGGTTGA
CTCATCACAGGACATCCGTTCTGCCATGTGTCTGACCATGGAGCAAATGGGTCTGGTTGTTGAAGCCCATCACCATGAAG
TTGCAACAGCAGGTCAGAACGAAGTGGCTACACGCTTCAATACCATGACCAAAAAAGCTGACGAAATTCAGATCTACAAA
TATGTCGTTCACAACGTGGCTCATGCCTACGGCAAAACGGCGACCTTTATGCCAAAACCGATGTTTGGTGATAATGGTTC
CGGTATGCACTGCCATATGTCGCTGTCTAAAGGCGGTCAGAACCTGTTCTCTGGCGATAAGTACGGCGGCCTGTCTGAAA
TGGCGCTGTTCTACATTGGCGGCATCATCAAGCATGCTAAAGCTATTAACGCCCTGGCGAACCCAACCACCAACTCCTAC
AAGCGTCTGGTGCCAGGTTATGAAGCGCCGGTGATGCTGGCCTATTCAGCGCGTAACCGTTCAGCCTCAATCCGTATCCC
GGTTGTTGCCAGCCCGAAAGCACGTCGTATTGAAGCGCGCTTCCCGGATCCAGCGGCTAACCCATACCTGGCGTTTACCG
CACTGCTGATGGCGGGTCTTGATGGCATCATCAACAAGATCCATCCTGGCGATGCGATGGACAAAAACCTGTATGACCTG
CCACCGGAAGAAGAAGCTGAAATTCCAAAAGTTGCAGGTTCACTGGAAGAAGCGCTGATTGCCCTGAACGAAGACCGCGA
GTTCCTGACCCGTGGCGGCGTGTTCACTGATGACGCGATCGATGCCTATATCGAACTGCGTAAATCCGAAAACGATCGTG
TGCGCATGACGCCGCACCCGGTTGAGTTCGAACTGTACTACAGCGTTTAA

Protein sequence :
MSAEHVLSMMNEHEVKFVDLRFTDTKGKEQHVTIPAHQVNADFFEEGKMFDGSSIGGWKGINESDMVLMPDATTAVMDPF
FEDSTLIIRCDILEPGTMQGYDRDPRSIAKRAEDYLRSSGIADTVLFGPEPEFFLFDDIRFGSSTSGSHVAIDDIEAAWN
TGKEYEGGNKGHRPGLKGGYFPVPPVDSSQDIRSAMCLTMEQMGLVVEAHHHEVATAGQNEVATRFNTMTKKADEIQIYK
YVVHNVAHAYGKTATFMPKPMFGDNGSGMHCHMSLSKGGQNLFSGDKYGGLSEMALFYIGGIIKHAKAINALANPTTNSY
KRLVPGYEAPVMLAYSARNRSASIRIPVVASPKARRIEARFPDPAANPYLAFTALLMAGLDGIINKIHPGDAMDKNLYDL
PPEEEAEIPKVAGSLEEALIALNEDREFLTRGGVFTDDAIDAYIELRKSENDRVRMTPHPVEFELYYSV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glnA YP_003728749.1 glutamine synthetase Not tested cag PAI Protein 8e-101 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
glnA YP_005193532.1 glutamine synthetase VFG1399 Protein 1e-113 50