Gene Information

Name : mutS (PANA5342_0996)
Accession : YP_005194426.1
Strain : Pantoea ananatis LMG 5342
Genome accession: NC_016816
Putative virulence/resistance : Virulence
Product : DNA mismatch repair protein mutS
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1022439 - 1025000 bp
Length : 2562 bp
Strand : -
Note : -

DNA sequence :
ATGAACAAAACAGCGCACATGGACTTGAGTACGCACACGCCAATGATGCAGCAATATTTACGCCTCAAGGCTGAGCATCC
GGATATCCTGCTGTTTTATCGCATGGGCGATTTCTACGAGCTGTTTTATGACGATGCCAAACGTGCCTCTCAGCTGTTAG
ACATTTCCTTAACCAAACGCGGTGCCTCGGCAGGCGAGCCGATTCCCATGGCCGGTGTGCCCCATCACGCCGTCGAAAAC
TATTTAGCCCGGCTGGTACAACTCGGTGAATCAGTCGCCATCTGTGAGCAAATTGGCGACCCTGCGCTGAGTAAAGGCCC
GGTGGAACGCAAAGTCGTGCGTATTGTTACCCCGGGCACCATCAGCGATGAAGCCCTGTTACAGGAACGCCAGGATAACC
TGCTGGCGGCAATTGTTCAGGGGGCGCGCGGCTATGGTTATGCCACGCTGGATATCAGCTCAGGCCGTTTTCGCCTGAGT
GAACCTGCCGATCAGGAAACGATGGCGGCAGAACTGCAGCGAACGAATCCTGCCGAGCTACTTTATCCGGAAGATTTTGC
TGCGATGGCGCTTATCGATCAGCGTCGCGGTTTACGTCGCCGTCCGCTTTGGGAGTTTGAAATCGACACGGCGCGTCAGC
AGCTCAACATGCAGTTTGGCACACGAGACTTAAACGGTTTTGGTGTTGAGCAGGCGCACCTGGGTCTGCGCGCCGCCGGC
TGTCTGCTGCAGTATGTGAAAGATACCCAACGAACCAGCCTTCCCCATATCCGCTCTCTTAGCATGGAGCGTCAGCAGGA
CAGCATCATTATGGATGCGGCCACGCGCCGTAACCTTGAAATTACGCAAAATCTTGCGGGCGGAACAGAGAACACGCTGG
CCGCCGTGCTGGATAAAACCGTCACGCCAATGGGAAGCCGGATGCTAAAGCGCTGGCTGCATATGCCGCTGCGTGACAGT
AGTATCATCGCGAAACGACAGGCATCAATTGCAGAGCTGCAACCACTCAGCGATGCGCTGCAACCCGTTCTGCGCCAGGT
CGGTGATTTAGAGCGTATTCTGGCCCGACTGGCGCTGCGAACGGCGCGCCCGCGTGATCTGGCGCGCATGCGCCATGCCT
TTCAGCAGTTGCCGGAACTCAACGATCTGCTGGCAAACGCCGAATCCGCCCAGTTGAAAACGCTGCGTGCACAGATGGGC
GAGTTTAGCGAACTGCGCACTCTGCTTGAGCAGGCCGTTGTCGAATCCCCCCCGGTATTAATCAGGGATGGTGGCGTTAT
TGCGCCCGGTTATAACGCCGAGCTGGATGAGTGGCGAGCACTCGCCGATGGCGCAACAGATTATCTGGATCGACTGGAAG
TTCGCGAACGCGAAAAGCTCGGTCTGGACAGCCTGAAAGTGGGCTTTAACGGCGTTCACGGCTACTACATTCAGGTCAGC
CGTGGCCAGAGCCATCAGGTGCCTATCCACTATGTTCGCCGTCAGACGTTGAAGAACGCAGAGCGCTACATCATTCCAGA
GCTGAAAGAGTACGAAGATAAAGTCCTTACCTCTAAGGGCAAAGCGCTGGCGCTGGAGAAAAGCCTGTATGAAGGCCTGT
TTGACCAGCTGTTGCCGCATCTTGAAGCGCTGCAGCTCAGTGCGGCGGCGCTGGCCGAACTGGATGTCCTGAGTAACCTC
GCGGAACGAGCCTGGACACTTAACTACTGCCGTCCGACGCTGCACGACAAGCCCGGGATTAAAATTACCGCCGGCCGCCA
TCCGGTAGTGGAGCAGGTCCTGAAAGAACCTTTTATCGCGAACCCGCTCTCTCTGGCCCCACAACGCCGCATGTTGATCA
TCACCGGTCCGAATATGGGCGGTAAAAGTACCTACATGCGCCAGGCGGCGTTAATCGCCCTGATGGCCTGGATTGGCAGC
TTCGTTCCTGCCGAAGAGGTGGTCATTGGTCCACTGGATCGTATCTTCACCCGTGTGGGCGCGGCAGATGATCTGGCCTC
CGGGCGTTCGACCTTTATGGTTGAAATGACCGAGACGGCCAATATTCTGCACAACGCGACAGAAAACAGCCTGGTCCTGA
TGGATGAAATCGGCCGCGGCACCTCGACGTATGACGGTTTATCGCTGGCCTGGGCCTGTGCGGAAAATCTGGCTAACCGT
ATTAAAGCGATGACCCTGTTTGCGACGCACTACTTTGAACTGACGACCCTGCCTGAAAAACTGGAAGGCGTGGTTAACGT
TCACCTGGACGCAGTTGAACACGGCGATACGATTGCGTTCATGCATAGCGTGCAAGACGGGGCTGCCAGTAAAAGCTACG
GACTGGCCGTAGCTGCGCTCGCGGGCGTGCCCAAAGAGGTCATTAAACGGGCGCGCAATAAGCTGAAAGAGCTCGAAACG
GTTTCCAGTCAGTCCGCGACGTCAAACATTGACGGCTCGCAGTTGCCGCTGTTGGTGGAAGAAACCTCCCCTGCCGTGGA
AGCACTTGAGGCACTGGATCCCGATACGCTGACACCGCGACAGGCGCTGGACTGGATCTACCGCCTTAAATCGCTGGTCT
GA

Protein sequence :
MNKTAHMDLSTHTPMMQQYLRLKAEHPDILLFYRMGDFYELFYDDAKRASQLLDISLTKRGASAGEPIPMAGVPHHAVEN
YLARLVQLGESVAICEQIGDPALSKGPVERKVVRIVTPGTISDEALLQERQDNLLAAIVQGARGYGYATLDISSGRFRLS
EPADQETMAAELQRTNPAELLYPEDFAAMALIDQRRGLRRRPLWEFEIDTARQQLNMQFGTRDLNGFGVEQAHLGLRAAG
CLLQYVKDTQRTSLPHIRSLSMERQQDSIIMDAATRRNLEITQNLAGGTENTLAAVLDKTVTPMGSRMLKRWLHMPLRDS
SIIAKRQASIAELQPLSDALQPVLRQVGDLERILARLALRTARPRDLARMRHAFQQLPELNDLLANAESAQLKTLRAQMG
EFSELRTLLEQAVVESPPVLIRDGGVIAPGYNAELDEWRALADGATDYLDRLEVREREKLGLDSLKVGFNGVHGYYIQVS
RGQSHQVPIHYVRRQTLKNAERYIIPELKEYEDKVLTSKGKALALEKSLYEGLFDQLLPHLEALQLSAAALAELDVLSNL
AERAWTLNYCRPTLHDKPGIKITAGRHPVVEQVLKEPFIANPLSLAPQRRMLIITGPNMGGKSTYMRQAALIALMAWIGS
FVPAEEVVIGPLDRIFTRVGAADDLASGRSTFMVEMTETANILHNATENSLVLMDEIGRGTSTYDGLSLAWACAENLANR
IKAMTLFATHYFELTTLPEKLEGVVNVHLDAVEHGDTIAFMHSVQDGAASKSYGLAVAALAGVPKEVIKRARNKLKELET
VSSQSATSNIDGSQLPLLVEETSPAVEALEALDPDTLTPRQALDWIYRLKSLV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
mutS AAA80578.1 DNA mismatch repair protein Virulence SPI-1 Protein 0.0 80

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
mutS YP_005194426.1 DNA mismatch repair protein mutS VFG0562 Protein 0.0 85