Gene Information

Name : oppd1 (SFHH103_05668)
Accession : YP_005192270.1
Strain :
Genome accession: NC_016815
Putative virulence/resistance : Unknown
Product : Uncharacterized ABC transporter ATP-binding protein yejF
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 869274 - 870875 bp
Length : 1602 bp
Strand : -
Note : -

DNA sequence :
ATGACAGAGATGATGGACTCCATTCTTGCCGTGCGCGGCCTCAAGGTGGATTTTTCGACGCCGGACGGCACGGTCGAGGC
CGTCAAGGGCATCGGTCTCGATGTTCGCAGCGGCGAGACGCTGGCGGTCGTCGGGGAATCCGGCTCCGGCAAGAGCCAGA
CGATGATGGGCATCATGGGCCTGCTCGCCAAGAACGGCACGGTCACTGGCTCGGCGCGCTACCGCGGCCAGGAGCTCGTC
GGCCTCGCGCCGAAGGCGCTGAACGACGTGCGCGGCTCGAAGATCACCATGATCTTCCAGGAGCCGATGACCTCGCTCGA
TCCGCTCTACCCGATCGGCCGGCAGATCTCCGAACCGATCGTCCATCACCGAGGCGGCACATTCAAGCAGGCGCGTAAGC
GCGTCCTCGAACTTCTGGAGTTGGTCGGTATCCCGGAACCCGCTCGCCGCATCGACAGCTACCCGCACGAATTGTCGGGC
GGCCAGCGTCAGCGCGTGATGATCGCCATGGCGCTTGCCAACGAGCCGGACATCCTGATCGCCGACGAACCGACAACGGC
GCTCGACGTGACCATTCAGGCGCAAATCCTCGATCTGCTCAAGTCGCTGCAGCGGCGCTTCGGCATGGCGATCGTGCTGA
TCACCCACGATCTCGGCATCGTCAAGCACTTCGCTGACCGCGTCGCCGTGATGCGCCGCGGCGAGGTGGTGGAAGAGGGG
AGGACGACGGAGATTTTCGAGCGGCCCAAGGCGGATTACACGAAGATGCTGCTCGCCGCCGAGCCGAGCGGCCGCAAGGC
TCCGCCGGCAGGGGGCGCGCCGATCATTCTCGAGGGTCGAGACGTGGCGGTCGAATACGCCATCGGCAAGGGCCTGTTCG
GCGCTTCGTCCTCCGTCTTCCGGGCAGTTGACGGCGTCAACCTGCGCCTGCGGCGGGGCCAGACGATCGGCATCGTCGGC
GAGTCCGGTTCGGGCAAATCGACGCTCGGGCGGGCGCTGTTGAGACTATTGCCGAGCAGCGGCTACTATCGCTTCGGCAC
GACCGACATCTCCGGCTTCGACCGGGGCGCCATGCGGCCGTTGCGCCGCGAACTGCAACTCGTCTTTCAGGATCCCTACG
GCTCGCTATCGCCACGCCTGACAGTGGGCGAAATCATCACCGAGGGCCTCTATGTGCATGAACCGGAGCTCAGCCGCGCA
GAACGCGACCGGCGCGCCATTGCGGCCCTGAAGGAAGTCGGCCTCGATCCCGCTTCGCGCAACCGCTATCCGCACGAGTT
CTCGGGCGGCCAGCGCCAGCGCATCGCCATTGCCCGGGCGATGATCCTGAAGCCGAAGGTGGTGATCCTCGACGAACCCA
CCTCGGCTCTCGACCGTTCGGTACAGGGCCAGGTGATCGAACTGCTGCGCGACCTGCAGGAAAAGCACGGTCTTTCGTAC
ATCTTCATCAGCCACGATCTTTCCGTCGTGAAGGCGATGTCGGACTATGTGATCGTCATGAAGAACGGCCGCATCGTCGA
AGAGGGGGAGACGGACGCGATCTTCGAAGCGCCGAGGGAGTCGTACACGAAGACGCTGATGGGAGCGGCGTTCAACGTTT
GA

Protein sequence :
MTEMMDSILAVRGLKVDFSTPDGTVEAVKGIGLDVRSGETLAVVGESGSGKSQTMMGIMGLLAKNGTVTGSARYRGQELV
GLAPKALNDVRGSKITMIFQEPMTSLDPLYPIGRQISEPIVHHRGGTFKQARKRVLELLELVGIPEPARRIDSYPHELSG
GQRQRVMIAMALANEPDILIADEPTTALDVTIQAQILDLLKSLQRRFGMAIVLITHDLGIVKHFADRVAVMRRGEVVEEG
RTTEIFERPKADYTKMLLAAEPSGRKAPPAGGAPIILEGRDVAVEYAIGKGLFGASSSVFRAVDGVNLRLRRGQTIGIVG
ESGSGKSTLGRALLRLLPSSGYYRFGTTDISGFDRGAMRPLRRELQLVFQDPYGSLSPRLTVGEIITEGLYVHEPELSRA
ERDRRAIAALKEVGLDPASRNRYPHEFSGGQRQRIAIARAMILKPKVVILDEPTSALDRSVQGQVIELLRDLQEKHGLSY
IFISHDLSVVKAMSDYVIVMKNGRIVEEGETDAIFEAPRESYTKTLMGAAFNV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
oppDF2 YP_005681814.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 4e-84 43
oppDF2 YP_005683914.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 4e-84 43
cpfrc_01561 YP_003783961.1 hypothetical protein Not tested PiCp 6 Protein 4e-84 43
oppDF2 YP_005686002.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 4e-84 43
dppD YP_005160017.1 putative peptide ABC transport system ATP-binding protein Not tested Not named Protein 3e-105 43