Gene Information

Name : tnpb3 (SFHH103_06588)
Accession : YP_005193185.1
Strain :
Genome accession: NC_016815
Putative virulence/resistance : Unknown
Product : Uncharacterized protein y4hO
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1846557 - 1846910 bp
Length : 354 bp
Strand : -
Note : -

DNA sequence :
GTGAATCCGTTTCCGATGGGAACAGGCGTCAAGGTCTGGCTTTCGACGGGGTATACGGACATGCGCTGTGGCTTTCCCTC
CCTGGCGCTTCGGGTGCAGGAGGTTCTGAAACGTGATCCGTTGTCAGGGCATCTCTTCGTCTTCAGGGGCCGCAGATCGG
ATATTTTGAAGATCATCTGGCATGATGGTCTGGGCGCCTGCCTTTTTACCCGGCGGCTGGAGAAGGGCCGGTTCATCTGG
CCGAATATGGAGGGCGGCGCGGTAGCGATCTCACCGGCGCAATTGTCTTATTTGTTGTCCGGGATCGACTGGCGCAATCC
GCAGGAAACCTGGCGTCCGACACGGGTCGGATAG

Protein sequence :
MNPFPMGTGVKVWLSTGYTDMRCGFPSLALRVQEVLKRDPLSGHLFVFRGRRSDILKIIWHDGLGACLFTRRLEKGRFIW
PNMEGGAVAISPAQLSYLLSGIDWRNPQETWRPTRVG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BCAM0247 YP_002232879.1 putative transposase Not tested BcenGI11 Protein 5e-27 57
aec52 AAW51735.1 Aec52 Not tested AGI-3 Protein 5e-29 57
unnamed ADD91739.1 hypothetical protein Not tested PAI-I AL862 Protein 5e-29 57
pB171ORF50 CAD66190.1 ORF50 protein of pB171 Not tested PAI III 536 Protein 5e-29 57
c3561 NP_755436.1 hypothetical protein Not tested PAI I CFT073 Protein 6e-27 55
ECUMN_3327 YP_002414007.1 putative transposase ORF2, IS66 family Not tested Not named Protein 6e-27 55
ECO103_3553 YP_003223420.1 hypothetical protein Not tested LEE Protein 1e-27 54
Z4316 NP_289542.1 hypothetical protein Not tested OI-122 Protein 1e-27 54
unnamed AAC31493.1 L0014 Not tested LEE Protein 1e-26 54
Z1132 NP_286667.1 hypothetical protein Not tested TAI Protein 1e-25 54
hp4 AAC61716.1 Hp4 Not tested PAI I CFT073 Protein 1e-26 54
Z1571 NP_287075.1 hypothetical protein Not tested TAI Protein 1e-25 54
unnamed AAL99258.1 unknown Not tested LEE Protein 1e-26 54
c3578 NP_755453.1 hypothetical protein Not tested PAI I CFT073 Protein 2e-26 54
unnamed ACU09438.1 IS66 family element orf2 Not tested LEE Protein 1e-26 54
Z4336 NP_289561.1 hypothetical protein Not tested OI-122 Protein 2e-26 54
Z5097 NP_290248.1 prophage-associated protein Not tested LEE Protein 2e-26 54
ECs4546 NP_312573.1 hypothetical protein Not tested LEE Protein 2e-26 54
l0014 CAD33776.1 L0014 protein Not tested PAI I 536 Protein 4e-20 53
unnamed AAL08461.1 unknown Not tested SRL Protein 3e-26 53
Z1160 NP_286695.1 hypothetical protein Not tested TAI Protein 1e-26 50
Z4338 NP_289563.1 hypothetical protein Not tested OI-122 Protein 1e-25 50
Z1599 NP_287103.1 hypothetical protein Not tested TAI Protein 1e-26 50
ECO103_3567 YP_003223430.1 hypothetical protein Not tested LEE Protein 1e-25 50
ECUMN_3364 YP_002414037.1 putative transposase ORF2, IS66 family Not tested Not named Protein 1e-26 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
tnpb3 YP_005193185.1 Uncharacterized protein y4hO VFG1665 Protein 2e-29 57
tnpb3 YP_005193185.1 Uncharacterized protein y4hO VFG1698 Protein 2e-27 55
tnpb3 YP_005193185.1 Uncharacterized protein y4hO VFG1709 Protein 6e-27 54
tnpb3 YP_005193185.1 Uncharacterized protein y4hO VFG0792 Protein 6e-27 54
tnpb3 YP_005193185.1 Uncharacterized protein y4hO VFG1517 Protein 2e-20 53
tnpb3 YP_005193185.1 Uncharacterized protein y4hO VFG1052 Protein 1e-26 53
tnpb3 YP_005193185.1 Uncharacterized protein y4hO VFG1737 Protein 4e-27 49