Gene Information

Name : oppd3 (SFHH103_06488)
Accession : YP_005193086.1
Strain :
Genome accession: NC_016815
Putative virulence/resistance : Unknown
Product : putative ATP-binding component of ABC transporter
Function : -
COG functional category : -
COG ID : -
EC number : 3.6.3.-
Position : 1739375 - 1741045 bp
Length : 1671 bp
Strand : -
Note : -

DNA sequence :
ATGGCAACGATCGAAAACAATGTCCCGGCACCGCAAGAGCGGACCGACCGCCATACGAAGGAAACGCGGCCCGTCATCGA
CGCCCGCAAGGTGGCTGTCAACTTCAAGGTCGAGAACGGCACGGTCGAGGCGGTGAAGGACGTCTCGTTCCAGCTCTATC
GCGGCGAGACCGTGGCGATCGTCGGCGAGTCCGGTTCGGGCAAGTCGGTGACGGCCCGCACCATCATGGGGCTTCTTTCC
AAGCGCGCCACGATCGCCTCGCATTCGCGCATCGAATACGACGGCCGCGACGTCCTGAAATTCTCGGCGCGGCAGCGCCG
GGCGCTGCGCGGCGACCGGATCTCGATGATCTTCCAGGAGCCGATGAGTTCGCTGAACCCGGTCTATACGATCGGCAGCC
AGATCATCGAGGCGATCCGGGCGCATCGCCGGATGAGCCGCCGTGCGGCGGCGGCCCGCGCGCTGGAATTGCTGCAGCAT
GTGCAGATCCCGGACCCGGAGGCGCGGCTCAACCAATATCCGCACCAGCTTTCCGGCGGCCAGCGCCAGCGCGTGATGAT
CGCCATGGCGCTTGCCAACGACCCGGACGTGCTGATCGCCGACGAGCCAACGACGGCCCTCGACGTCACCGTGCAGGCGC
AGATCCTCAACCTGATCCGCAAGCTGCAGCAGGAGCTCGGCATGGCGGTGATTCTCATCACTCACGACCTGACGGTGGTG
CGGCAGTTCTCCGACTACGTCTATGTAATGCAGCTCGGCGAGGTGAAGGAGCACAACACGACGGCGGCGCTCTTTGCCAA
TCCGCAGCATGCCTATACGCGCCGGCTGCTCGCCTCCGAGCCGTCGGGCTCGGCGAAACCGCTGCCGGACAATGCGCCGA
TCATGCTCGACGGCCGCAACGTCCGGGTCTCGTTCATGCTGAGGAAGGGCGGCTTCTTCAAGCCGGAGCTGAAGGAGCTC
GTCGCGGTCGACAGCCTGAGCCTCAATCTGCGCCGCCACGAGACGCTCGGCCTCGTCGGCGAGTCCGGCTCCGGCAAGAC
CACTTTCGGCCAGGCGCTGATCCGGCTGATCAACACCGATGCCGGCGAGATCTATTACGACGGCGAGCCGATCCATAACA
AGGACCGCTGGGGCATGCGGCCGCTGCGGTCGCGGATCCAGATCGTCTTCCAGGATCCGTTCTCCTCGCTCAACCCGCGC
ATGTCGATCGGCCAGATCATCGAAGAGGGCCTGATCGTCAACGGCATCGGCGAAAACCGCAAGGACAGGCTCGCCCGTGT
AGAGGATGCGCTGGTCAGCGCCGGCATGCCGGCCAATATCCTGTCGCGCTTCCCGCACGAATTTTCCGGCGGCCAGCGCC
AGCGCATCGCGATTGCCCGCGCCATCGCACTTGAGCCGGAATTCATCCTGCTTGACGAGCCGACCTCGGCGCTCGATCTC
TCGGTGCAGGCGCAGATCATCGAGCTGTTGCGCAAGCTCCAGGACGAGCGGGGCCTCAGCTACCTCTTCATCTCCCACGA
CCTGAAGGTCGTGCGCGCCCTCTGCCACCGCGTCGTGGTCATGCAGCACGGCAAGATCGTCGAAGAGGGGCCGGTGAACG
AAATTCTTTCCAATCCCAAGACTGCCTACACGGAGCGGCTCGTCAGAGCCGCCTTCGAAGTGGCCGCGTGA

Protein sequence :
MATIENNVPAPQERTDRHTKETRPVIDARKVAVNFKVENGTVEAVKDVSFQLYRGETVAIVGESGSGKSVTARTIMGLLS
KRATIASHSRIEYDGRDVLKFSARQRRALRGDRISMIFQEPMSSLNPVYTIGSQIIEAIRAHRRMSRRAAAARALELLQH
VQIPDPEARLNQYPHQLSGGQRQRVMIAMALANDPDVLIADEPTTALDVTVQAQILNLIRKLQQELGMAVILITHDLTVV
RQFSDYVYVMQLGEVKEHNTTAALFANPQHAYTRRLLASEPSGSAKPLPDNAPIMLDGRNVRVSFMLRKGGFFKPELKEL
VAVDSLSLNLRRHETLGLVGESGSGKTTFGQALIRLINTDAGEIYYDGEPIHNKDRWGMRPLRSRIQIVFQDPFSSLNPR
MSIGQIIEEGLIVNGIGENRKDRLARVEDALVSAGMPANILSRFPHEFSGGQRQRIAIARAIALEPEFILLDEPTSALDL
SVQAQIIELLRKLQDERGLSYLFISHDLKVVRALCHRVVVMQHGKIVEEGPVNEILSNPKTAYTERLVRAAFEVAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
dppD YP_005160017.1 putative peptide ABC transport system ATP-binding protein Not tested Not named Protein 3e-98 43
oppDF2 YP_005681814.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 1e-73 42
oppDF2 YP_005683914.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 1e-73 42
cpfrc_01561 YP_003783961.1 hypothetical protein Not tested PiCp 6 Protein 1e-73 42
oppDF2 YP_005686002.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 1e-73 42