Gene Information

Name : kpsT (SFHH103_06304)
Accession : YP_005192902.1
Strain :
Genome accession: NC_016815
Putative virulence/resistance : Virulence
Product : capsule polysaccharide export transport system ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : 3.6.3.38
Position : 1539859 - 1540518 bp
Length : 660 bp
Strand : +
Note : -

DNA sequence : 
ATGATTCGGTTCGAGCAGGCGACGAAATATGCCCGCGCCAAGGGCATCAAGAAGCCGATTATCGAGGACGCCTCGCTGAC
GCTTAACCGCGGCAAGAGCGTTGGTCTGCTCGGCCGCAACGGCGCAGGCAAGTCGACGCTGCTCCGGCTGATTGCCGGCG
CGATCAGGCTCGACAAGGGGCGAATCATTCGCCGCGGCAAGATCTCCTGGCCGCTCGGTTTCCAGGGTAGCTTTCAGAGC
TCGCTTACCGGCGAACAGAATGTACGCTTTGTCGCCCGCATCTACGGTGTGAACACAGAAGAACTGATCGCCTATGTCGA
GGATTTCGCCGAACTCGGCCCCTTCTACAAGGCACCGGTCGGCACCTATTCCTCCGGCATGAAAGCGCGGCTTGCCTTCG
GCTTGAGCATGGGCGTGAACTTCGATTATTATCTCGTGGACGAAATCACCGCGGTTGGTGACGCAAACTTTAAGAAAAAG
TGCCAGGCTGTCTTCGAGACCAAGCTTCAGGATTCCGACTTGATCATGGTCTCGCACAGCACCGGTACGATCCGCACCTA
TTGCGATTGCGGGGTCGTACTGGAAAAAGGCAAGCTGACTTATTATGACGATGTCGAGGACGCGATCCGCGCGCACGACA
AGAACATGAAGGGGAACTAA

Protein sequence : 
MIRFEQATKYARAKGIKKPIIEDASLTLNRGKSVGLLGRNGAGKSTLLRLIAGAIRLDKGRIIRRGKISWPLGFQGSFQS
SLTGEQNVRFVARIYGVNTEELIAYVEDFAELGPFYKAPVGTYSSGMKARLAFGLSMGVNFDYYLVDEITAVGDANFKKK
CQAVFETKLQDSDLIMVSHSTGTIRTYCDCGVVLEKGKLTYYDDVEDAIRAHDKNMKGN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsT CAE85223.1 KpsT protein Virulence PAI V 536 Protein 2e-47 51
kpsT YP_854396.1 polysialic acid transport ATP-binding protein KpsT Not tested PAI I APEC-O1 Protein 3e-50 50
ctrD NP_273138.1 capsule polysaccharide export ATP-binding protein CtrD Not tested IHT-A Protein 2e-45 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
kpsT YP_005192902.1 capsule polysaccharide export transport system ATP-binding protein VFG1449 Protein 9e-51 50
kpsT YP_005192902.1 capsule polysaccharide export transport system ATP-binding protein VFG0258 Protein 6e-46 48
kpsT YP_005192902.1 capsule polysaccharide export transport system ATP-binding protein VFG0696 Protein 3e-46 46
kpsT YP_005192902.1 capsule polysaccharide export transport system ATP-binding protein VFG2563 Protein 2e-46 45