Gene Information

Name : traG (SFHH103_06248)
Accession : YP_005192847.1
Strain :
Genome accession: NC_016815
Putative virulence/resistance : Virulence
Product : Type IV secretion system-coupling protein virD4
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1491830 - 1493740 bp
Length : 1911 bp
Strand : +
Note : -

DNA sequence :
ATGGCATTGAGGGGCAAACCGCAACCGCCGTTGCTGCTCATTTTCGTGCCGATCGCTGTCACCGCCTTTGCGGTCCAAGT
TGTGGGTTGGCGGTGGCCGGAGTTGGCGGCCGGTATGTCGGGCAAAACGGCATATTGGTTTATGCGGGCGGCACCTTTGC
CGCCGATTTTGTTCGGGCCGCTCACCGGACTCCTGATGGTCTGGGCTTTGCCGTTGCACCGGCGACGACCCGTCGCAATC
GCGACCCTTGTATGCTTTCTGGCCGTCGCCGGCTTCTACGCCCTGCATGAATTTGGTCGCCTCGCACCGTCAGTCGAAAG
CGGAGTGGTCACATGGGAGCGGGCGCTCTCCTATCTCGACATAGTCGCCGTCATCGGCGCGTTCGCTGGTTTCATGGCGG
TAGCGGTCTCCGCCCGCATCTCCATCGTCGTGCCCGAACCAATGAAGCGTGCCAAGCGTGGTATCTTCGGGGACGCCGAC
TGGCTGACGATGTCGGCGGCGGCAAGGCTGTTCCCGGATGATGGCGAGATCGTCGTCGGTGAGCGATACCGCGTCGACAA
GCAAATCGTTCATGGGCTGCCCTTTGATCCGAACGATAGAAGCACATGGGGACAGGGCGGCAAAGCCCCTTTGCTCACCT
ACAAGCAGGACTTCGATTCCACCCATATGCTGTTCTTTGCCGGGTCGGGGGGATACAAGACGACCAGCAACGTCGTGCCG
ACGGCGCTACGCTACACCGGACCACTGATCTGCCTCGATCCCTCGACCGAGGTCGCGCCGATGGTGGTTGAGCACCGAAC
CCGCGTCCTTGGGCGAGAGGTGATGATACTCGATCCGACGAACCCGATCATGGACTTCAACGTTCTCGACGGGATAGAGA
GTTCGCGACAAAAGGAAGAAGACATTGTCGGCATCGCGCATATGCTGCTGTCGGAAAGCGTGCGTTTCGAATCTTCTAGC
GGCGCCTATTTCCAGAACCAGGCGCACAATCTCCTCACCGGCCTCTTGGCGCATGTGATGCTGTCACCGGAATATGCGGG
GCGGCGCAATCTGCGCAGCCTCCGGCAAATCGTCTCGGAGCCCGAGCCCTCGGTGCTGGCGATGTTGCGCGACATTCAAG
AGCATTCCGCTTCGGCCTTCATCCGCGAAACACTCGGCGTCTTCACCAACATGACGGAACAGACATTCAGCGGCGTCTAT
TCGACCGCCTCGAAGGATACGCAGTGGCTCTCGCTCGACAGTTACGCCGCGCTCGTCTGCGGCAATGCCTTCAAATCGAG
CGATATCGTCACCGGCAATAAGGACGTGTTCCTGAATATCCCGTCTTCCATCCTGCGCTCTTATCCGGGCATCGGCCGCG
TCATCATCGGCTCGCTGATCAACGCGATGATACAGGCAGATGGCGCATTCGAGCGCCGCGCTCTCTTCATGCTGGATGAG
GTCGATCTTCTCGGTTACATGCGCGTGCTGGAGGACGCCCGCGACCGTGGCCGCAAGTACGGCATCACCATGATGCTGAT
GTACCAATCGGTAGGGCAGTTGGAGCGGCATTTCGGGAAAGACGGCGCGACGTCATGGATCGACGGCTGCGCTTTCGCCA
GCTACGCGGCAATCAAGGCGCTCGATACGGCGCGCAACGTCTCGGCGCAATGTGGGGAAATGACCGTCGAGGTACAGGGC
CGCTCCCGCAACATCGGCTGGGACACGAGGAACGGCGGCAACCGCAAATCCGAAAGCATCAACTTCCAGCGCCGGTCGCT
GATCATGCCGCACGAGATCACCCAATCAATGCGCAAGGATGAACAGATCATCATCGTGCAGGGCCACAGTCCGATCCGTT
GTGGGCGGGCGATCTACTTCCGGCGGAAGGAGATGGATCAGGCTGCCAAGGCCAACCGCTTCGTCAAGTGA

Protein sequence :
MALRGKPQPPLLLIFVPIAVTAFAVQVVGWRWPELAAGMSGKTAYWFMRAAPLPPILFGPLTGLLMVWALPLHRRRPVAI
ATLVCFLAVAGFYALHEFGRLAPSVESGVVTWERALSYLDIVAVIGAFAGFMAVAVSARISIVVPEPMKRAKRGIFGDAD
WLTMSAAARLFPDDGEIVVGERYRVDKQIVHGLPFDPNDRSTWGQGGKAPLLTYKQDFDSTHMLFFAGSGGYKTTSNVVP
TALRYTGPLICLDPSTEVAPMVVEHRTRVLGREVMILDPTNPIMDFNVLDGIESSRQKEEDIVGIAHMLLSESVRFESSS
GAYFQNQAHNLLTGLLAHVMLSPEYAGRRNLRSLRQIVSEPEPSVLAMLRDIQEHSASAFIRETLGVFTNMTEQTFSGVY
STASKDTQWLSLDSYAALVCGNAFKSSDIVTGNKDVFLNIPSSILRSYPGIGRVIIGSLINAMIQADGAFERRALFMLDE
VDLLGYMRVLEDARDRGRKYGITMMLMYQSVGQLERHFGKDGATSWIDGCAFASYAAIKALDTARNVSAQCGEMTVEVQG
RSRNIGWDTRNGGNRKSESINFQRRSLIMPHEITQSMRKDEQIIIVQGHSPIRCGRAIYFRRKEMDQAAKANRFVK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
virD4 YP_001610010.1 conjugal transfer coupling protein TraG Not tested Not named Protein 1e-164 51

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
traG YP_005192847.1 Type IV secretion system-coupling protein virD4 VFG2242 Protein 1e-169 53