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Name : lpsL (SFHH103_00769) Accession : YP_005188093.1 Strain : Sinorhizobium fredii HH103 Genome accession: NC_016812 Putative virulence/resistance : Virulence Product : capsular polysaccharide biosynthesis protein I Function : - COG functional category : - COG ID : - EC number : - Position : 848753 - 849778 bp Length : 1026 bp Strand : - Note : - DNA sequence : GTGCGTTACCTCATCACCGGCACCGCAGGTTTCATCGGCTTTCACGTCGCCAAGCGGCTGATAGATGATGGGCATTTCGT GGTCGGTTTCGATGGCATGACGCCCTATTACGACGTGACGCTCAAGCAGCGCCGCCACGCGATCCTCGAACGCTCCAACG GCTTCAAGGCGGTGACGGCAATGCTCGAGGACCGCGCCGCTCTCGACCGCGCCGCAGAGCTTGCGGAACCGGAGGTCATC ATCCACCTCGCCGCGCAGGCGGGGGTCCGCTACAGCCTCGAGAATCCGAAGGCTTACGTCGACGCGAACCTTCTCGGTTC CTGGAACATCCTCGAGCTTGCCAGGGCAATCGGCCCGAAGCATCTGATGCTGGCATCGACCTCGTCGATCTACGGCGCCA ATGAGAAGATACCATTTGCCGAGGCGGACCGGGCCGACGAGCCGATGACGCTCTATGCGGCGACGAAGAAATCGATGGAG CTGATGGCGCACAGCTACGCCCATCTCTACAAGGTGCCGACCACCGCCTTCCGGTTCTTCACCGTCTATGGCCCCTGGGG CCGGCCCGACATGGCGCTCTTCAAATTCGTCGACGCCATCCTGAACGGCCGGCCGATCGATATCTATGGGGAAGGCCGGA TGAGCCGCGACTTCACCTATATCGACGATCTTGTCGAAGGCATCCTGCGGCTTTCCCATGTCGCGCCGTCCGAAGCCAAT CGCGTCGGCCCGGACCTGGCGCAGGACACGCTTTCGGGGCACGCGCCGTTCCGCGTCGTCAATGTCGGTGGCGGCCAGCC GGTGGACCTGATGACCTTCGTCGAAACCGTCGAAAAGGCCGTCGGTCGGCCCGCCGTGCGCAATATGCTGCCAATGCAGA TGGGCGACGTGCCGCGCACCTACGCGTCACCGGACCTGCTCGAGGCGCTGACCGGCTTCAAGCCGACGATGCCCATCGAG GAAGGCGTCGCCCGCTTTGTGGAATGGTACGAGCAATATTATCGTCCTGCGGAAACCATTGCCTGA Protein sequence : MRYLITGTAGFIGFHVAKRLIDDGHFVVGFDGMTPYYDVTLKQRRHAILERSNGFKAVTAMLEDRAALDRAAELAEPEVI IHLAAQAGVRYSLENPKAYVDANLLGSWNILELARAIGPKHLMLASTSSIYGANEKIPFAEADRADEPMTLYAATKKSME LMAHSYAHLYKVPTTAFRFFTVYGPWGRPDMALFKFVDAILNGRPIDIYGEGRMSRDFTYIDDLVEGILRLSHVAPSEAN RVGPDLAQDTLSGHAPFRVVNVGGGQPVDLMTFVETVEKAVGRPAVRNMLPMQMGDVPRTYASPDLLEALTGFKPTMPIE EGVARFVEWYEQYYRPAETIA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cap1I | AAA64648.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 1e-79 | 52 |
