Gene Information

Name : SFHH103_03663 (SFHH103_03663)
Accession : YP_005190979.1
Strain : Sinorhizobium fredii HH103
Genome accession: NC_016812
Putative virulence/resistance : Unknown
Product : putative transposase for insertion sequence IS408
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3989749 - 3991248 bp
Length : 1500 bp
Strand : +
Note : -

DNA sequence :
TTGAAGCGAGTGGATACGATTGCGCGTGTTCGACGGGCCTTCCATGTGCAGGGCTGGTCGGTGAAGAAGATCGTCCGGGA
ACTTCATGTGTCGCGCAACACGGTTCGCAAGATACTGCGTTCCGACGAGACCGATTTTACCTATGAACGAGAACGGCAAC
CGCTGCCAAGGATCGGAGCCTGGAAGGCGGAGATCGAGCGGTTTCTGACAGCCAATGAGGGCAAGCCGTCGCGCGAGCGA
CTGACGCTAATCCGGATTTACGAGGAGGTCAGGGCACTCGGCTACGATGGCAGTTATGACGCGATCCGGCGATATGCCAA
GACCTGGGCGAAGAGCCGGGGAGCCGTGACGGCGGAAGCCTATGTGCCGCTCTATTACGCGCCAGGTGAGGCTTACCAGT
TCGACTGGAGCCACGAGATCATTCTGATCAACGGGGTGACGACGACCGTCAAGGTCGCGCATGTCCGACTCTGCCACAGC
CGAATGATGTTCGTCCGGGCCTATATGCGCGAGAGCCAGGAGATGGTGTTCGACGCGCATGACAAGGCCTTCGCCTTCTT
CCGTGGCACCTGCACGCGCGGCATTTACGACAACATGAAGACGGCGGTCGAGGCCGTGTTCGTCGGCAAGGAGCGGCAAT
ACAATCGCCGCTTCCTGCAGATGTGCAGCCACTATCTGGTTCACCCCGTTGCCTGCACGCCCGCATCCGGCTGGGAGAAG
GGACAGGTCGAGAACCAGGTCGGTCTCGTGCGCGAACGCTTCTTCACCCCACGTCTTCGGGTCAAAAGCCTGGAAGAGCT
GAACGTCTGGCTGCTCGATAAGTGCATCGCCTACGCCAAGGCGCACCGCCATCCCGAGCAGACCGAGCGGATGATCTGGC
AAATGTTCGAGGAGGAGCGCGGCAGCCTGGTGCATTATGTCGGGCCGTTCGATGGCTTCCATTGTGTCCCGGCCTCGGTG
TCGAAGACCTGCACGGTCCGCTTCGACAACAACAAATATTCCGTCCTCTCGACTGCGGTCGGCCGCCCTGTCGAGGTTCA
TGCCTATGCCGAGAAGATCGTGATCCGGCAGGATGGGGTGAACGTCGGTGAGCATCCTCGTTGCTTTGGCCGTGGCGAGA
CGATCTACGATCCCTGGCATTATGTGCCTGTTCTGGCTCGCAAACCCGGTGCTTTGCGCAACGGTGCGCCGTTCCGGGAA
TGGGTCTTACCCGCAGCGATGGAGAAAGTGCGCCGGCGGCTGAAGAGCGTCCCTGACGGTGATCGGCAAATGGTCACCAT
CCTCGGCTGTGTTCCCACCGACGGTCTGGCGGCCGTCGATGCTGCCTGTCAGGAGGCTTTGGATCACGGCGTCTGCTCGG
CCTCGGTGATCATCAACATTCTGGCCCGGAGCCGTGATCCGGCTCCGGCAATTACTCTTCAGACCCCCGATGCGCTTCGT
CTGACCCATGAGCCGGCCGCCGACTGCGCACGGTATGACAGCCTCAGGAGGGCAAGCTGA

Protein sequence :
MKRVDTIARVRRAFHVQGWSVKKIVRELHVSRNTVRKILRSDETDFTYERERQPLPRIGAWKAEIERFLTANEGKPSRER
LTLIRIYEEVRALGYDGSYDAIRRYAKTWAKSRGAVTAEAYVPLYYAPGEAYQFDWSHEIILINGVTTTVKVAHVRLCHS
RMMFVRAYMRESQEMVFDAHDKAFAFFRGTCTRGIYDNMKTAVEAVFVGKERQYNRRFLQMCSHYLVHPVACTPASGWEK
GQVENQVGLVRERFFTPRLRVKSLEELNVWLLDKCIAYAKAHRHPEQTERMIWQMFEEERGSLVHYVGPFDGFHCVPASV
SKTCTVRFDNNKYSVLSTAVGRPVEVHAYAEKIVIRQDGVNVGEHPRCFGRGETIYDPWHYVPVLARKPGALRNGAPFRE
WVLPAAMEKVRRRLKSVPDGDRQMVTILGCVPTDGLAAVDAACQEALDHGVCSASVIINILARSRDPAPAITLQTPDALR
LTHEPAADCARYDSLRRAS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
istA AAN62228.1 putative transposase Not tested PAGI-3(SG) Protein 2e-106 48
EC042_4098 YP_006098381.1 transposase Not tested Tn2411 Protein 8e-80 41