|
Name : ista15 (SFHH103_03414) Accession : YP_005190731.1 Strain : Sinorhizobium fredii HH103 Genome accession: NC_016812 Putative virulence/resistance : Unknown Product : putative transposase for insertion sequence IS408 Function : - COG functional category : - COG ID : - EC number : - Position : 3696676 - 3698226 bp Length : 1551 bp Strand : + Note : - DNA sequence : ATGCCTGCGGAGAGACTGGAGATGCGGCGTGTCCGCGAGATATTGAGATATCGGTTCGAACAAGGACTTGGCCACAAGTC GATTGCGGTCAGGGTTGGCGCTGCACCGTCGACGGTGCGCGAGACGCTGCGGCGTGCGGCCGTTGCAGGGCTATCGTGGC CGTTGGGTGACGACGTCAGCGATGCCGTCCTGGAAGCGGCGCTTTACAAGGGGGCCGGGACGAAGACGGGTCACCGTCGG AGCCCTGAGCCGGACTGGGCGCAGGTCCATCGCGAGCTCAAGCGCAAGCACATGACGCTGCAGATCCTGTGGGACGAATA CATCAGCCGTTATCCGGACGGCTATCGCTACAGTCGGTATTGTGACCTTTACCGCGGTTGGGCAATGAAGCTGCCTGTGA CGATGCGGCAGGATCACGCGGCCGGCGATAAGCTGTTCGTCGACTATGCCGGCGACACGGTCACGGTTGTTGTTGATCGG CTGTCGGGCAAGACACGGCAGGCGCACCTGTTCGTGGCGGTTCTGGGAGCATCGAGCCTTTCATATGCGCAGGCACGCTG GAGCGAGACGCTTCCCGACTGGATTGAATGCCATATCCTGGCCCTGGAGTTCTTTGGCGGTGCGCCAGCCTTGCTGGTTC CCGACAATGCCAAGGTAGCGATCATCAAGGCCTGCCACTTCGATCCCCAGGTCAACCGGACGTATTGCGGGATGGCGGCC CATTATGGCAGCGCCGTCTTGCCAACGCGGCCGCGACGCCCGCGTGACAAGGCGAAAGTGGAAGCTGCGGTTCGTATCGT CGAACGCTGGCTATTGGGCCGGCTGCGCCATCGCATCTTCTATAGCTTGGCCGAGGTCAATGCGGCGATCGGCGAATTGC TTCATGATCTCAATGACAAACGAGTCCTGCGCCGCGTTGGCGTCACGCGCCGTCAACTGTTCGAGGAGCTTGATCGTCCG GTTTTGCGACCACTGCCTGTGGAACGCTATGTCTTTGCCGAATGGCGTATACGGCGTGCCGGGCTGGATTATCACGTCGA GATCGAGCGGCACTATTATTCCGTTCCCTATCGCTTCGCCCGCGAGCAGGTTGAGGCTCGTATCACCGCCAATACGATCG AGATCTTCCACAAGGGCGAGCGTATTGCCGCCCATCGCCGCTCCAGCGGCAACGGCAAGCACACGACGATCCCCGATCAT ATGCCTTCGGCGCATCGCCGTTTTGCCGACTGGACGATCGAACGCATTCAACGCGAAGCCTCCGCCATGGGACCGGATGT CGCGCTGTTGTGCGAGCGCATCCTTGCCGACAGGCCACATCCCGAGCAGGGCTTTCGAGCTTGCCTCGGGATCATCCGCC TCAGCAAGAGCTTTGGCCGCGACAGGGTCAATGCCGCTTGCGGGCGGGCGCTGGAGATCGGGGCCCGGACCTATGGCTCG GTGCGCTCCATCCTCGACAATCACCTTGACCGAACGGCTGCCTCAAATGGAGCGGCGTCGCATGAACCGATCCATCACGC CAACATCCGCGGCCCGCGCTATTACCACTAA Protein sequence : MPAERLEMRRVREILRYRFEQGLGHKSIAVRVGAAPSTVRETLRRAAVAGLSWPLGDDVSDAVLEAALYKGAGTKTGHRR SPEPDWAQVHRELKRKHMTLQILWDEYISRYPDGYRYSRYCDLYRGWAMKLPVTMRQDHAAGDKLFVDYAGDTVTVVVDR LSGKTRQAHLFVAVLGASSLSYAQARWSETLPDWIECHILALEFFGGAPALLVPDNAKVAIIKACHFDPQVNRTYCGMAA HYGSAVLPTRPRRPRDKAKVEAAVRIVERWLLGRLRHRIFYSLAEVNAAIGELLHDLNDKRVLRRVGVTRRQLFEELDRP VLRPLPVERYVFAEWRIRRAGLDYHVEIERHYYSVPYRFAREQVEARITANTIEIFHKGERIAAHRRSSGNGKHTTIPDH MPSAHRRFADWTIERIQREASAMGPDVALLCERILADRPHPEQGFRACLGIIRLSKSFGRDRVNAACGRALEIGARTYGS VRSILDNHLDRTAASNGAASHEPIHHANIRGPRYYH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| APECO1_3528 | YP_854247.1 | transposase for ISEc12 | Not tested | PAI I APEC-O1 | Protein | 8e-110 | 44 |
| unnamed | CAC39294.1 | hypothetical protein | Not tested | LPA | Protein | 1e-109 | 44 |
| ORF_6 | AAZ04417.1 | putative transposase subunit | Not tested | PAI I APEC-O1 | Protein | 6e-110 | 44 |
| VPI2_0005c | ACA01822.1 | IstA | Not tested | VPI-2 | Protein | 2e-100 | 41 |
