Gene Information

Name : SFHH103_03026 (SFHH103_03026)
Accession : YP_005190343.1
Strain : Sinorhizobium fredii HH103
Genome accession: NC_016812
Putative virulence/resistance : Virulence
Product : putative betaine aldehyde dehydrogenase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3280251 - 3281726 bp
Length : 1476 bp
Strand : -
Note : -

DNA sequence :
ATGCGCAGCGAACTCTATATCGATGGAAAATGGACCGCGGCCGCGAACGGCAGGACGTTCGACGTCGTCAATCCGGCGAC
GGAAGAGGTGATCCACAGAATAGCCGCGGCAACGGCGGAAGACGTCGACGCGGCGGTGAAGGCCGCACGGCGTGCCTTCG
ACAAGGATGGCTGGCCGAAGCTGTCGGGAGCACAAAGGGCAAAATACCTGCGCGCCATCGCTGACGGCATTCGGGCCCGG
CAGTCGGAAATCGCCCGGCTCGAAGTGATCGACAACGGCAAGCCGTTTCCGGAGGCGGATTGGGATGTCGCTGACGCGGC
CGGGTGCTTCGACTTCTACGCGGGGCTTGCCGAACAGCTCGACAACAATCCGGAAGAGCCGATTGCGCTTGCCGACGCCC
GCTTCACCTCCAAGGCGGTCAAGGAGCCGATCGGCGTTGCAGGCGCAATCATCCCCTGGAACTATCCGCTGCTGATGGCC
GCCTGGAAGGTTGCGCCGGCCCTTGCCGCCGGCTGCACGATCGTGCTGAAGCCGGCCGAAGTCACCTCCTTGACGGCGCT
GGAACTCGCAGCGATCGCCGATGACGTTGGCCTGCCACCGGGCGTCCTCAACATCGTCACCGGCTCCGGCTCAGTCGCCG
GACAGGCGATCATCGACCACAGGCAAGTCGACAAACTCGCCTTCACCGGTTCCGGGCCGGTCGGCTCGAAGATCATGGCG
GCGGCGGCCCGCGACATCAAGCGCGTCAGCCTCGAACTCGGCGGCAAGTCGCCTTTCGTCGTCTTCGAGGATGCGGATAT
CGACGAGGCGGTCGAATGGATCATGTTCGGCATCTTCTGGAACCAGGGGCAGGTCTGCTCGGCGACGTCGCGCATCCTCG
TCCAGGAAGGGATTTACGATCGCCTGTTGGCGCGGCTTATCGAGGAGACGAAGAAGATCAGGATCGGCGACGGTCTCGAA
GACGGCGTGCTGCTCGGACCGCTCGTCTCGAAGCGTCAGCACGAGCAGGTCGTCGCGGCGATCGAAGCGGCGAGAGCCGC
CGGTGCGACCATCGCCTGCGGCGGCAAGCGCCCTGAAGGCTTCGACACGGGCTATTATCTCGAGCCGACGATCCTGACCG
AGGTGCCCCTGGAGAGCGACGCCTGGCGCGAGGAGATCTTTGGGCCGGTCGTCTGCATTCGGCCATTTTCGACCGAGGAG
GAAGCAATCGAGCTTGCCAACGATTCCCGCTTCGGTCTCGCGGCGGCGGTGATGTCGAAGGACGATGTTCGCGCCGAGCG
GGTAGCGAGCGCCTTCCGCGCCGGCATCGTCCGGATCAACTGCTCGCAGCCGACCTTCACGGAAGCGCCCTGGGGTGGCT
ACAAGGAATCCGGCATCGGCCGCGAGCTCGGTCGCTGGGGCCTCGAAAACTATCTCGAGACCAAGCAGATCACCCGCTTT
GCCACCGGCGAGAAATGGGGCTGGTATATCAAATGA

Protein sequence :
MRSELYIDGKWTAAANGRTFDVVNPATEEVIHRIAAATAEDVDAAVKAARRAFDKDGWPKLSGAQRAKYLRAIADGIRAR
QSEIARLEVIDNGKPFPEADWDVADAAGCFDFYAGLAEQLDNNPEEPIALADARFTSKAVKEPIGVAGAIIPWNYPLLMA
AWKVAPALAAGCTIVLKPAEVTSLTALELAAIADDVGLPPGVLNIVTGSGSVAGQAIIDHRQVDKLAFTGSGPVGSKIMA
AAARDIKRVSLELGGKSPFVVFEDADIDEAVEWIMFGIFWNQGQVCSATSRILVQEGIYDRLLARLIEETKKIRIGDGLE
DGVLLGPLVSKRQHEQVVAAIEAARAAGATIACGGKRPEGFDTGYYLEPTILTEVPLESDAWREEIFGPVVCIRPFSTEE
EAIELANDSRFGLAAAVMSKDDVRAERVASAFRAGIVRINCSQPTFTEAPWGGYKESGIGRELGRWGLENYLETKQITRF
ATGEKWGWYIK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
orf17 AAO17183.1 Orf17 Not tested tcd island Protein 4e-65 41
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 7e-61 41
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 3e-61 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SFHH103_03026 YP_005190343.1 putative betaine aldehyde dehydrogenase VFG0082 Protein 1e-61 41