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Name : lysS (SFHH103_02969) Accession : YP_005190286.1 Strain : Sinorhizobium fredii HH103 Genome accession: NC_016812 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase Function : - COG functional category : - COG ID : - EC number : - Position : 3214434 - 3215930 bp Length : 1497 bp Strand : + Note : - DNA sequence : ATGAACGAGAAGACAGAAACCGCCGGCCTTTCCTCCGACGCGACGGAAGTGCGCGCCCAGAAGCTGAAGCTGCTGCGCGA GCAGATCGGCGATGTCTATCCGGCGCATTTTCACCGGTCGATGACCAATGTCGAACTCGCTGCCAAATATGAAGGCCTGG AGCCGGACACCGAAACGCAGGATGTCGTGACCGTCGCCGGCCGCGTCTTTTCCTCGCGCAACTCCGGCATGTTCATGGAT CTCCATGACGCTTCCGGCAAGATCCAGATCTTCTCGCACAAGGACACGACGCCGGAAGAGGCGCGCGCGCTGTTGCCGAT GATCGACATCGGCGACATCATCGGCGTTACGGGTATTGTCCGTCGGACCAAGCGCGGCGAGCTCACGATCAACGCGCAGG CGATCACCATGCTGACCAAGTCGCTGCTGCCGATGCCGGAGAAGTGGCATGGTCTTGCGGATATCGAGCTGCGCTACCGC AAGCGCCATCTCGACATCATGACCAATGAAGAGTCGAAGCTCCGCTTCCGGCAGCGCAGCCGGATCGTTTCCGGAATCCG ACGCTTCATGGAAAACGACGGCTTCATGGAAGTCGAGACGCCGATGCTGCATTCGGTCTATGGCGGCGCAACCGCCGAGC CGTTCAAGACGCATCACAATACTCTGAAGCTCGACATGTACCTGCGCATCGCGCCGGAGCTGTATCTGAAGCGCACACTG GTTTCGGGGCTTACCGACAAGGTCTTCGAGATCAACCGCAACTTCCGCAACGAAGGCGTCTCCACCCGGCACAATCCGGA ATTCACGATGATGGAGTGCTATTGGGCCTATGCCGACTACGAGGACATCATGGACCTCGTCGAGCGGCTTTTCGCTGAAC TGGCGGTCTCGATCCACGGCACGACGGAATTCGCCTATGGCGACAAGGAAATCTCCTTCAAGGGTCCGTTCCGCCGCGTG CCCATGCCGGACGCCGTCAAGGAAGTGACCGGCATCGACTTCCTCGCGATCAAGACCGACGAGGAAGCGCGTGCCGCCAC CCGCGCCGCCGGCTTCGAAATCGAGAAGGACGCAACCTGGGGCGAATGCCTCGCTTTCGTCTTCGAAGAGAAGGTCGAGC CGACGCTGATCCAGCCGGCCCACGTCACGCACTTCCCGAAGGATATCTCTCCCTTCGCCAAGGAAGTGCCGGGCGAGCCG CGTCTCGTCGAACGTTTCGAGACCTATTGCAACACCTGGGAACTCGGCAACGCCTTTTCGGAACTGAATGATCCGGAAGA GCAGCGCGCCCGCATGGTCGAGCAGCTTGAGCAGGCCCATGTGCGCGGCGAAAAGGCCAAGCAGCTCGACGACGAATTCC TCGATGCGATCGACCAGGGCATGCCGCCGGCCGGCGGCCTCGGCATCGGCGTCGACCGGCTGATCATGCTGCTCACCAAC GCGCCGTCGATCCGCGACGTCATTCTCTTCCCGGCCCGTCGCCACAAGGCCGACTGA Protein sequence : MNEKTETAGLSSDATEVRAQKLKLLREQIGDVYPAHFHRSMTNVELAAKYEGLEPDTETQDVVTVAGRVFSSRNSGMFMD LHDASGKIQIFSHKDTTPEEARALLPMIDIGDIIGVTGIVRRTKRGELTINAQAITMLTKSLLPMPEKWHGLADIELRYR KRHLDIMTNEESKLRFRQRSRIVSGIRRFMENDGFMEVETPMLHSVYGGATAEPFKTHHNTLKLDMYLRIAPELYLKRTL VSGLTDKVFEINRNFRNEGVSTRHNPEFTMMECYWAYADYEDIMDLVERLFAELAVSIHGTTEFAYGDKEISFKGPFRRV PMPDAVKEVTGIDFLAIKTDEEARAATRAAGFEIEKDATWGECLAFVFEEKVEPTLIQPAHVTHFPKDISPFAKEVPGEP RLVERFETYCNTWELGNAFSELNDPEEQRARMVEQLEQAHVRGEKAKQLDDEFLDAIDQGMPPAGGLGIGVDRLIMLLTN APSIRDVILFPARRHKAD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 2e-94 | 47 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysS | YP_005190286.1 | lysyl-tRNA synthetase | VFG1668 | Protein | 1e-94 | 47 |
