Gene Information

Name : SFHH103_02750 (SFHH103_02750)
Accession : YP_005190069.1
Strain : Sinorhizobium fredii HH103
Genome accession: NC_016812
Putative virulence/resistance : Resistance
Product : putative ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2957246 - 2957965 bp
Length : 720 bp
Strand : +
Note : -

DNA sequence : 
GTGGGGAACGAGGCATCGGCCGTTGCCCTTGAGGCGCGCGAACTCACCAAGATCTATCGGATGGGTACGGTAGAAGTTCA
CGCCCTGCGCGGCGTGAACGTGGACCTTCGCGAGGGCGAACTGGTGGTTCTGCTGGGGCCATCCGGAAGTGGCAAATCGA
CCTTGCTCAATATCCTCGGCGGGCTGGACAGGCCCACAAGCGGCAGCGTTATGTTTCGCGGCCACGAGCTCACAATGGAC
AGTGAACGCGCGCTCAACCTCTACCGCCGCAACCACGTCGGCTTCGTCTTTCAGTTCTACAATCTCATACCTAGCCTGAC
CGCGCGCGAAAACGTCTCCCTCGTAACCGAGATTGCGAAGAACCCGATGCCGCCCACAGAAGCGCTGACAATGGTCGGCC
TCGGCGACAGGCTCGATCATTTTCCCGCGCAGATTTCCGGCGGCGAGCAGCAACGAGTCGCTATTGCCCGCGCGATCGCC
AAGCGACCCGACCTGCTACTTTGCGACGAGCCGACCGGCGCGCTCGACAGCACGACTGGGATCCTCGTGCTCGACGCGAT
TTTGAAGATCAATCGGGAACTCGGCACAACGACGGCGCTGATTACGCACAACGCAGTGATTGCCGAGATTGCCAATCGCG
TGCTCTACTTTGCCGACGGGCGTATCGTCGAAACGCGGGCAAATGCCGTTCAGCGCACTCCGGCCGAGCTCGTCTGGTGA

Protein sequence : 
MGNEASAVALEARELTKIYRMGTVEVHALRGVNVDLREGELVVLLGPSGSGKSTLLNILGGLDRPTSGSVMFRGHELTMD
SERALNLYRRNHVGFVFQFYNLIPSLTARENVSLVTEIAKNPMPPTEALTMVGLGDRLDHFPAQISGGEQQRVAIARAIA
KRPDLLLCDEPTGALDSTTGILVLDAILKINRELGTTTALITHNAVIAEIANRVLYFADGRIVETRANAVQRTPAELVW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-28 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-29 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 5e-29 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-29 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SFHH103_02750 YP_005190069.1 putative ABC transporter ATP-binding protein NC_012469.1.7685735. Protein 1e-48 51
SFHH103_02750 YP_005190069.1 putative ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 2e-29 45
SFHH103_02750 YP_005190069.1 putative ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 1e-37 42
SFHH103_02750 YP_005190069.1 putative ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 4e-35 41
SFHH103_02750 YP_005190069.1 putative ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 9e-34 41