Gene Information

Name : xerd3 (SFHH103_02649)
Accession : YP_005189969.1
Strain : Sinorhizobium fredii HH103
Genome accession: NC_016812
Putative virulence/resistance : Unknown
Product : tyrosine recombinase XerD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2845858 - 2846796 bp
Length : 939 bp
Strand : +
Note : -

DNA sequence :
ATGACGGATCTTTCGGAGGCCCATCTCGAAGCGTTTCTGGAAATGATGAGCGCCGAGCGGGGTGCGGCGATCAACACGCT
GCAATCCTACGAACGCGATCTCAGGGACGCGCGCTCCTTCCTGCGCTCCTCAGGGACGCGGCTCAATAGCGCCACGGCCG
ACGATCTGAGACGCTATCTGTCGCACTTGGCCGGCGAGGGCTTCAAGGCATCCTCGCAGGCACGCAGGCTGTCGGCGCTG
AGGCAATTCTACAAGTTCCTCTATGCGGAGGGCCTGCGCGGCGACGACCCGACCGGCATCCTCGATGCGCCCAAGAAGGC
GCGTGCCCTGCCCAAGACGCTCAGCATAGACGACGTTACCCGACTGATCGGCCAGGCCGAGACGGAGGCCGCCTCTGGCG
AGGACACCTTCGCGAAACTTCGCATGCACGCACTGATCGAGCTTCTCTATGCGACCGGCATGCGTGTCAGCGAGCTCGTC
TCGCTGCCAGCGAGCGTGCTTGCACAGGATGGTCGCTTCCTGGTGATCCGCGGCAAGGGAAACAAGGACAGGCTTGTGCC
GCTGTCGCAGGCGGCGATCCGCGCCATGCAGACCTACGGCGATGCGCTGCGCAGGAGAGCGGCGGAAGCGGAGAGCCCCT
GGCTGTTCCCCTCCTCCGGCAAATCCGGCCACCTGCCGCGCCAGGTCTTTGCCCGCGACCTCAAGAGTCTCGCCGCGCGC
GCCGGTATCAGGGTCGCTGCAATCTCGCCGCATGTGCTGCGCCACGCCTTCGCCAGTCATCTGCTGGCCAATGGCGCCGA
CCTCCGCGCCGTGCAGGAACTGCTCGGTCATTCGGACATTTCGACGACACAAATCTATACACATGTGCTGGAAGAACGGC
TGCACGAGCTGGTGCAAAACCACCACCCTCTTGCCAAACAGGCGAAAAAACAGGATTAG

Protein sequence :
MTDLSEAHLEAFLEMMSAERGAAINTLQSYERDLRDARSFLRSSGTRLNSATADDLRRYLSHLAGEGFKASSQARRLSAL
RQFYKFLYAEGLRGDDPTGILDAPKKARALPKTLSIDDVTRLIGQAETEAASGEDTFAKLRMHALIELLYATGMRVSELV
SLPASVLAQDGRFLVIRGKGNKDRLVPLSQAAIRAMQTYGDALRRRAAEAESPWLFPSSGKSGHLPRQVFARDLKSLAAR
AGIRVAAISPHVLRHAFASHLLANGADLRAVQELLGHSDISTTQIYTHVLEERLHELVQNHHPLAKQAKKQD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 1e-44 44
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 1e-44 44