Gene Information

Name : SFHH103_02576 (SFHH103_02576)
Accession : YP_005189896.1
Strain : Sinorhizobium fredii HH103
Genome accession: NC_016812
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2764494 - 2766008 bp
Length : 1515 bp
Strand : -
Note : -

DNA sequence :
GTGCCAGGTCGTCACATAACCGATCATCAGATGAGGCTTTTCATGAAGTTACGACAAGAGCACAGGGTTGAGGTCGCCGC
CGCGAAGGCGTCGCTCAGCAGAGCAACGGCCTATCGCATCGAGAAGAACGCGCAACTGCCATCACAAGTGAAGACGCCGC
GCGGCCGTCGGCGTCCCGATCCACTCGCCGACATCTTCGATGCCGAGGTCGTGCCGCTGCTGAAGGCGGCACCTGGCATT
CGTCCGGTCGCCGTCTTCGATGAGATGTTGCGCCGCCATCCTGAGCTCAGCGAAGGCGTTCGCCGGACAATGGAACGGCG
GATCCGTGCCTGGCGGGCCATCAATGGCGACGAGCAGGAAGTCATCTTTCGCCAGGTTCATGAGCCCGGCCGACTGGGGC
TTTCCGACTTCACCAACATGAACGAACTGGGGATCACGATCGCAGGCCAGCCGCTCGATCACCTGCTTTATCACTTCCGG
CTCGCCTATTCCGGCTTCGAACACGCCCACGTCGTCCTCGGTGGCGAAAGCTTCGTGGCGCTGGCCGAAGGGCTGCAGAA
CGCTCTCTGGTTCCTCGGCGGCGCGCCGCTTTACCATCGCAGCGACAGCCTGTCGGCGGCCTTCCGCAATCTCGATGCCG
ATGCCAAGGAGGACCAGACGCGGCGCTACGCAGAGCTTTGCGCGCACTACCGAATGACGCCGACCCGCAACAACAAGGGC
ATTGCCCACGAGAACGGTGCGATTGAGAGCCCGCATGGCCACCTCAAGAATGCGATCCGCGATGCCCTGCTGCTGCGCGG
CACCCGTGACTTCGACGATCTCGATGGCTATCGCGGCTTCATCGATGAGATCGTCAGCCGGCGTAATGCCCGCTATGGCA
AGCGCATCGACGCCGAGCGGGCGGCGCTGCAGCCGTTGCCGGGAACGCGCACCAGCGATTTTGAGGAGGTTGTCGTGCGG
GTCTCGCGCAGCGGCGGCTTCACCTTGCGCAAGGTCTTTTACACCGTGCCATCACGGCTCATCGGGCACCGGCTGCGCGT
GCGCCTTTACGACGAGCGTCTTGACCTCTTTATCGGCGGCACGCATCTGATGACCCTCCAAAGAGGGCGTGCACATGCCA
GCGGCAAGCACGACCAGGTGGTCGATTATCGGCATGTCATCCATTCGCTGCGCAAAAAGCCGATGGCGCTCCTTCAGCTT
GTCTATCGCGACAAGCTGTTTCCGCGGCAGGAATACCGAAGGGCCTTCGAGACCCTGCTCGACCGGCTTTCCGACAAGCA
GGCCTGCAAGATCACCGTCGAGCTCCTGGCCTTGGCCCACGATCGGGGCTGCGAGCGGGAACTGGCAGAGCGGCTCGCTA
AAACACTCGATGCGGGCGAACTGCCGGACATCATCGCGCTGAGGACTTTCTTCACGCCCGATCCGGCACAGTTGCCCACC
GTCAACGTTCGTCTCGCCTCCCTCCAGGGCTATGAGGCCCTGATCGACGCGCGTCATCTGGAGGACGCCGCATGA

Protein sequence :
MPGRHITDHQMRLFMKLRQEHRVEVAAAKASLSRATAYRIEKNAQLPSQVKTPRGRRRPDPLADIFDAEVVPLLKAAPGI
RPVAVFDEMLRRHPELSEGVRRTMERRIRAWRAINGDEQEVIFRQVHEPGRLGLSDFTNMNELGITIAGQPLDHLLYHFR
LAYSGFEHAHVVLGGESFVALAEGLQNALWFLGGAPLYHRSDSLSAAFRNLDADAKEDQTRRYAELCAHYRMTPTRNNKG
IAHENGAIESPHGHLKNAIRDALLLRGTRDFDDLDGYRGFIDEIVSRRNARYGKRIDAERAALQPLPGTRTSDFEEVVVR
VSRSGGFTLRKVFYTVPSRLIGHRLRVRLYDERLDLFIGGTHLMTLQRGRAHASGKHDQVVDYRHVIHSLRKKPMALLQL
VYRDKLFPRQEYRRAFETLLDRLSDKQACKITVELLALAHDRGCERELAERLAKTLDAGELPDIIALRTFFTPDPAQLPT
VNVRLASLQGYEALIDARHLEDAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
r6 AAC61728.1 transposase R6 Not tested PAI I CFT073 Protein 6e-86 43
unnamed AAL67386.1 R6-like protein Not tested PAI II CFT073 Protein 6e-86 43
c3607 NP_755482.1 hypothetical protein Not tested PAI I CFT073 Protein 7e-86 43
c5144 NP_756992.1 hypothetical protein Not tested PAI II CFT073 Protein 7e-86 43
unnamed AAL67341.1 R6-like protein Not tested PAI II CFT073 Protein 3e-85 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SFHH103_02576 YP_005189896.1 hypothetical protein VFG1728 Protein 3e-86 43