Gene Information

Name : SFHH103_02517 (SFHH103_02517)
Accession : YP_005189837.1
Strain : Sinorhizobium fredii HH103
Genome accession: NC_016812
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase family protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2697626 - 2699122 bp
Length : 1497 bp
Strand : -
Note : -

DNA sequence :
ATGGCAAAGATGGCTGATCTCGTTCGTTTCAAGAATACCGTCGACGGGCAATCCTGTGAAAGCGTGAGTAGCCGTTGGCT
TGCCTCCGTCAATCCCTATACCGGGGAGGCGTGGGCCGAGATACCGCACTGCGACGCTGACGACGCCTCGGCAGCGATCG
AGTCCGCGCATCGCGCCTTCACGAAGGGACCGTGGGCGACCATGACGGCGACGAACCGGGGCAAGCTGTTGCGGCGTCTC
GGCGATCTGATTGCCAGGGACGCCGAAAAGCTCGCGGCCATTGAAACCCGCGACAACGGCAAGCTTTATGCCGAGATGCA
TGGCCAGCTTCGCTACATGCCGGAGTGGTTCTATTATTTCGGCGGCCTTGCCGACAAGATCGAAGGCGGCGTCCTTCCGA
TCGACAAGCCGAACCTGTTCACCTACACCAAGAAAGAGCCGCTTGGCGTGGTGGTGGCCATCACGCCGTGGAACTCGCCG
CTGCTTCTCTTGACCTGGAAGCTGGCGCCGGCGCTCGCAGCCGGCAACACGATCGTCATCAAGCCGTCCGAATTCACGTC
CTGCTCGACGCTTGCCCTGATGGAGCTCGTCAAGGAAGCGGGCTTCCCGGACGGTGTCATCAACACGGTCACCGGTTACG
GCCATGAACTCGGATCGACACTCGTCGAGCATCCGATGGTGGCGAAGGTCGCCTTCACCGGGGGCGACGCCACGGGGGCC
GCGGTTTATGCGGGTGCGGCCAAGCACATCAAGCACGTGACGCTCGAGCTCGGTGGCAAGTCGCCCAATATTGTCTTTGC
CGATGCCAACATCGATGACGCCGTCAAGGGCGCCATTTCCGGCATCTTTGCCGCCTCCGGCCAGACCTGCATCGCCGGCT
CCCGCCTCCTCGTGCAACGCTCGGTCTACGAGGAGGTCTCGCAGAAGGTCGTGGCCTTTGCAAAGAGCGCCCGCCTCGGC
AATCCGATGGAGGAGACCACCCAGGTCGGCCCCGTCACCACTCTTCCGCAACGCAAGAAGATCCTCGACTACATGGACGT
CGCGCGCGGCGAAGGCGCCCGCTGCCTGCTCGGCGGCGGCACGCCGGACGATCCGGAACTCGCCAAAGGCTGGTTCGTCG
AGCCGACCATCTTCGGCGACGTGTCGAATTCGATGCGCATCGCCCGCGAGGAGGTCTTCGGGCCGATCCTCTCGATCATT
CCATTCGAGGACGACGAGGAGGCGGTCGAAATCGCCAATGACACGATCTACGGGCTCGCATCCGGCGTCTGGACATCGAA
CATCCGCCGGGCGTTCACGATGGCCGACAGGATCCGCGCGGGAACCGTGTGGGTCAACACCTATCGCGCCGTGAGCTTCA
TGGCGCCATTCGGCGGCTACAAGATGAGCGGCATCGGGCGCGAGAGCGGTCAGGCGGCGATCGACGAGTATCTGCAGACC
AAGAGCGTCTGGATCAATCTGGCCGAGGGCGTCGCCAATCCCTTCGTCCTGCGCTGA

Protein sequence :
MAKMADLVRFKNTVDGQSCESVSSRWLASVNPYTGEAWAEIPHCDADDASAAIESAHRAFTKGPWATMTATNRGKLLRRL
GDLIARDAEKLAAIETRDNGKLYAEMHGQLRYMPEWFYYFGGLADKIEGGVLPIDKPNLFTYTKKEPLGVVVAITPWNSP
LLLLTWKLAPALAAGNTIVIKPSEFTSCSTLALMELVKEAGFPDGVINTVTGYGHELGSTLVEHPMVAKVAFTGGDATGA
AVYAGAAKHIKHVTLELGGKSPNIVFADANIDDAVKGAISGIFAASGQTCIAGSRLLVQRSVYEEVSQKVVAFAKSARLG
NPMEETTQVGPVTTLPQRKKILDYMDVARGEGARCLLGGGTPDDPELAKGWFVEPTIFGDVSNSMRIAREEVFGPILSII
PFEDDEEAVEIANDTIYGLASGVWTSNIRRAFTMADRIRAGTVWVNTYRAVSFMAPFGGYKMSGIGRESGQAAIDEYLQT
KSVWINLAEGVANPFVLR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 2e-62 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SFHH103_02517 YP_005189837.1 aldehyde dehydrogenase family protein VFG0082 Protein 9e-63 41