|
Name : SFHH103_02402 (SFHH103_02402) Accession : YP_005189722.1 Strain : Sinorhizobium fredii HH103 Genome accession: NC_016812 Putative virulence/resistance : Virulence Product : aldehyde dehydrogenase Function : - COG functional category : - COG ID : - EC number : - Position : 2571000 - 2572433 bp Length : 1434 bp Strand : - Note : - DNA sequence : ATGCTCGACAAGCGCAAGTTCTACATCAACGGCGAATGGGTCGAACCAGCAGCACAGAACGACCTTTACGTGCTCAATCC TGCAACCGAAAAGCCGATCGCCGTCATCTCCCTCGGCACGGCGGTCGATATCGACCGAGCCGTCGCGGCCGCGAAGAAGG CCTTCGAGGCCTATAGCCGGACCAGCCTGGAGGAACGGCTGACGCTTCTCGAAAAGCTTCTGGCGATCTACAAGCGCCGC TACGACGAGATGGCCGATACGATCACCGCGGAGCTCGGCGCGCCGAAAACCATGAGCCGCGAGCAGCAGTCTGATGTCGG CGTTGGCCATCTTCAGGGTTACATCGACGCGCTGAAGCGCCTGAAATTGCGCGAAAAACTTTCGAACGGCGACACGCTGA TGCGCGAGCCGATCGGAGTGTGCGGCTTGATCACGCCATGGAACTGGCCGGTCAACCAGATTGCCCTGAAGGTGGTGCCG GCGCTGGCGACCGGCTGCACCTGCGTTTTGAAGCCGAGCGAGTTCACGCCGCTCAATGCCATGCTCTATGCGGAAATGAT CGACGAGGCGGGTTTCCCGCGCGGCGTCTTCAACCTCGTCAATGGCGACGGCCTTCATGCCGGCGCCGCACTTTCGAAGC ACAAGGACATCGACATGATGTCCTTCACCGGTTCGACGCGGGCCGGCATCGCCGTCAGTAAGGATGCCGCCGATACGGTG AAGCGCGTCACGCTGGAGCTCGGCGGCAAGTCGCCGAACATCGTCTTCGCCGATGCCGATCTCGAGGAGCGGGTGACCGC CAGCGTCCTCGAATGCTTCAACAATTCCGGCCAGTCCTGCGACGCGCCGACACGGATGCTGGTCGAGCGCAGCGCCTACG AGGACGTTGTAGCGATCGCAAGGCGGGCCGGCCGGGAGGCGACGGTCGGCGACCCGACCAGGGAAGGCGCGCATATCGGG CCGCTGGTCAGCCACATCCAGTTCGAACGCGTGCAGGCGCTGATCGAGGCGGGTGTCGGCGAAGGTGCGCGCCTCCTCGT CGGCGGTCCCGGCAAGCCGGAAGGCTTCGAGACCGGATACTTCGTCAAGCCGACGATCTTCGCGGATGTCGACAACTCGA TGCGCATTGCGCGCGAGGAGGTGTTCGGGCCGGTGCTTGCAATCATTCCCTTCGACACGGAGGAGGAGGCGATCGCCATC GCCAACGATACGAGTTATGGGCTTGCGGCCTATGTGCAGACGGGCAATCCCGAGCGAGCCGAACGGGTCGCCGCCCGGCT GCGTGCCGGCATGGTGCACATCAATGGCGGGCCGCATCGCTATGGAAGCCCGTTCGGCGGCTACAAGCAGTCGGGCAATG GCCGCGAAGGTGGTACCTTCGGCCTCGAGGATTTCCTCGAGGTGAAGACGGTTCATCTGCCGGACGCGGCCTGA Protein sequence : MLDKRKFYINGEWVEPAAQNDLYVLNPATEKPIAVISLGTAVDIDRAVAAAKKAFEAYSRTSLEERLTLLEKLLAIYKRR YDEMADTITAELGAPKTMSREQQSDVGVGHLQGYIDALKRLKLREKLSNGDTLMREPIGVCGLITPWNWPVNQIALKVVP ALATGCTCVLKPSEFTPLNAMLYAEMIDEAGFPRGVFNLVNGDGLHAGAALSKHKDIDMMSFTGSTRAGIAVSKDAADTV KRVTLELGGKSPNIVFADADLEERVTASVLECFNNSGQSCDAPTRMLVERSAYEDVVAIARRAGREATVGDPTREGAHIG PLVSHIQFERVQALIEAGVGEGARLLVGGPGKPEGFETGYFVKPTIFADVDNSMRIAREEVFGPVLAIIPFDTEEEAIAI ANDTSYGLAAYVQTGNPERAERVAARLRAGMVHINGGPHRYGSPFGGYKQSGNGREGGTFGLEDFLEVKTVHLPDAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hpaE | AAO17179.1 | HpaE | Not tested | tcd island | Protein | 3e-58 | 46 |
| VC0819 | NP_230467.2 | aldehyde dehydrogenase | Not tested | VPI-1 | Protein | 3e-47 | 43 |
| aldA | AAC12273.1 | aldehyde dehydrogenase | Virulence | VPI | Protein | 2e-47 | 43 |
| aldA | AAK20747.1 | aldehyde dehydrogenase | Virulence | VPI | Protein | 2e-47 | 43 |
| aldA | AAK20776.1 | aldehyde dehydrogenase | Virulence | VPI | Protein | 2e-47 | 43 |
| ORF SG19 | AAN62241.1 | putative aldehyde dehydrogenase | Not tested | PAGI-3(SG) | Protein | 2e-54 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| SFHH103_02402 | YP_005189722.1 | aldehyde dehydrogenase | VFG0082 | Protein | 1e-47 | 43 |
