Gene Information

Name : ista1 (SFHH103_00240)
Accession : YP_005187569.1
Strain : Sinorhizobium fredii HH103
Genome accession: NC_016812
Putative virulence/resistance : Unknown
Product : putative transposase for insertion sequence IS408
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 269281 - 270831 bp
Length : 1551 bp
Strand : -
Note : -

DNA sequence :
ATGCCTGCGGAGAGACTGGAGATGCGGCGTGTCCGCGAGATATTGAGATATCGGTTCGAACAAGGACTTGGCCACAAGTC
GATTGCGGTCAGGGTTGGCGCTGCACCGTCGACGGTGCGCGAGACGCTGCGGCGTGCGGCCGTTGCAGGGCTATCGTGGC
CGTTGGGTGACGACGTCAGCGATGCCGTCCTGGAAGCGGCGCTTTACAAGGGGGCCGGGACGAAGACGGGTCACCGTCGG
AGCCCTGAGCCGGACTGGGCGCAGGTCCATCGCGAGCTCAAGCGCAAGCACATGACGCTGCAGATCCTGTGGGACGAATA
CATCAGCCGTTATCCGGACGGCTATCGCTACAGTCGGTATTGTGACCTTTACCGCGGTTGGGCAATGAAGCTGCCTGTGA
CGATGCGGCAGGATCACGCGGCCGGCGATAAGCTGTTCGTCGACTATGCCGGCGACACGGTCACGGTTGTTGTTGATCGG
CTGTCGGGCAAGACACGGCAGGCGCACCTGTTCGTGGCGGTTCTGGGAGCATCGAGCCTTTCATATGCGCAGGCACGCTG
GAGCGAGACGCTTCCCGACTGGATTGAATGCCATATCCTGGCCCTGGAGTTCTTTGGCGGTGCGCCAGCCTTGCTGGTTC
CCGACAATGCCAAGGTAGCGATCATCAAGGCCTGCCACTTCGATCCCCAGGTCAACCGGACGTATTGCGGGATGGCGGCC
CATTATGGCAGCGCCGTCTTGCCAACGCGGCCGCGACGCCCGCGTGACAAGGCGAAAGTGGAAGCTGCGGTTCGTATCGT
CGAACGCTGGCTATTGGGCCGGCTGCGCCATCGCATCTTCTATAGCTTGGCCGAGGTCAATGCGGCGATCGGCGAATTGC
TTCATGATCTCAATGACAAACGGGTCCTGCGCCGCGTTGGCGTCACGCGCCGTCAACTGTTCGAGGAGCTTGATCGTCCG
GCTTTGCGACCACTGCCTGTGGAACGCTATGTTTTTGCCGAATGGCGTATACGGCGTGCCGGGCTGGATTATCACGTCGA
GATCGAGCGGCACTATTATTCCGTTCCCTATCGCTTCGCCCGCGAGCAGGTCGAGGCTCGTATCACCGCCAATACGATCG
AGATCTTCCACAAGGGCGAGCGTATTGCCGCCCATCGCCGCTCCAGCGGCAACGGCAAGCACACGACGATCCCCGATCAT
ATGCCTTCGGCGCATCGCCGTTTTGCCGACTGGACGATCGAACGCATTCAACGCGAAGCCTCCGCCATGGGACCGGATGT
CGCGCTGTTGTGCGAGCGCATCCTTGCCGACAGGCCACATCCCGAGCAGGGCTTTCGAGCTTGCCTCGGGATCATCCGCC
TCAGCAAGAGCTTTGGCCGCGACAGGGTCAATGCCGCTTGCGGGCGGGCGCTGGAGATCGGGGCCCGGACCTATGGCTCG
GTGCGCTCCATCCTCGACAATCACCTTGACCGAACGGCTGCCTCAAATGGAGCGGCGTCGCATGAACCGATCCATCACGC
CAACATCCGCGGCCCGCGCTATTACCACTAA

Protein sequence :
MPAERLEMRRVREILRYRFEQGLGHKSIAVRVGAAPSTVRETLRRAAVAGLSWPLGDDVSDAVLEAALYKGAGTKTGHRR
SPEPDWAQVHRELKRKHMTLQILWDEYISRYPDGYRYSRYCDLYRGWAMKLPVTMRQDHAAGDKLFVDYAGDTVTVVVDR
LSGKTRQAHLFVAVLGASSLSYAQARWSETLPDWIECHILALEFFGGAPALLVPDNAKVAIIKACHFDPQVNRTYCGMAA
HYGSAVLPTRPRRPRDKAKVEAAVRIVERWLLGRLRHRIFYSLAEVNAAIGELLHDLNDKRVLRRVGVTRRQLFEELDRP
ALRPLPVERYVFAEWRIRRAGLDYHVEIERHYYSVPYRFAREQVEARITANTIEIFHKGERIAAHRRSSGNGKHTTIPDH
MPSAHRRFADWTIERIQREASAMGPDVALLCERILADRPHPEQGFRACLGIIRLSKSFGRDRVNAACGRALEIGARTYGS
VRSILDNHLDRTAASNGAASHEPIHHANIRGPRYYH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
APECO1_3528 YP_854247.1 transposase for ISEc12 Not tested PAI I APEC-O1 Protein 5e-110 45
ORF_6 AAZ04417.1 putative transposase subunit Not tested PAI I APEC-O1 Protein 4e-110 45
unnamed CAC39294.1 hypothetical protein Not tested LPA Protein 7e-110 44
VPI2_0005c ACA01822.1 IstA Not tested VPI-2 Protein 1e-100 41