Gene Information

Name : qacE (SFHH103_02311)
Accession : YP_005189631.1
Strain : Sinorhizobium fredii HH103
Genome accession: NC_016812
Putative virulence/resistance : Virulence
Product : putative multidrug efflux protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2485022 - 2485351 bp
Length : 330 bp
Strand : -
Note : -

DNA sequence : 
ATGCTCTACACCGTTCTGGTGATCGCCATCGTCTTCGAGGTGCTCGGCACCTCGGCCATGCAGGCGGCGCAGCATTTCAC
GCGGCTCGCGCCGACCGTGCTGATGGTGGTCTGCTATGCCGTCGCCTTCTTCTTCCTGTCCTATACGCTGCGCTACATTC
CCGTCGGGATCGCTTATGCGCTGTGGAGCGGCCTTGGCATCGTGCTGATTTCAGGGGTCGGCTACATTACGTTCGGCCAG
AAGCTCGACCTCGCTGCGATCCTCGGCCTGGCGCTGATCATCGCCGGCGTCCTGGTTCTCAATCTCTTCTCGAAGTCGAC
CTTCCATTGA

Protein sequence : 
MLYTVLVIAIVFEVLGTSAMQAAQHFTRLAPTVLMVVCYAVAFFFLSYTLRYIPVGIAYALWSGLGIVLISGVGYITFGQ
KLDLAAILGLALIIAGVLVLNLFSKSTFH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42067.1 hypothetical protein Not tested PAI II 536 Protein 8e-09 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
qacE YP_005189631.1 putative multidrug efflux protein BAC0002 Protein 7e-15 58
qacE YP_005189631.1 putative multidrug efflux protein NC_010410.6003348.p0 Protein 7e-15 58
qacE YP_005189631.1 putative multidrug efflux protein NC_002695.1.913273.p Protein 3e-14 56
qacE YP_005189631.1 putative multidrug efflux protein BAC0150 Protein 3e-14 56
qacE YP_005189631.1 putative multidrug efflux protein BAC0322 Protein 5e-18 54
qacE YP_005189631.1 putative multidrug efflux protein BAC0324 Protein 1e-16 54
qacE YP_005189631.1 putative multidrug efflux protein CP004022.1.gene1549. Protein 1e-12 52
qacE YP_005189631.1 putative multidrug efflux protein BAC0377 Protein 8e-14 52
qacE YP_005189631.1 putative multidrug efflux protein CP001138.1.gene1489. Protein 1e-14 52
qacE YP_005189631.1 putative multidrug efflux protein BAC0327 Protein 9e-13 41
qacE YP_005189631.1 putative multidrug efflux protein BAC0329 Protein 1e-11 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
qacE YP_005189631.1 putative multidrug efflux protein VFG1586 Protein 3e-09 42