Gene Information

Name : SFHH103_02183 (SFHH103_02183)
Accession : YP_005189503.1
Strain : Sinorhizobium fredii HH103
Genome accession: NC_016812
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2336975 - 2338483 bp
Length : 1509 bp
Strand : -
Note : -

DNA sequence :
ATGCTGCATCAGAAGATTCTCGATAACCCGTTCAAGCACAAGTACGGAAATTTCATCGGCGGTGAGTGGCGCGAGCCGGT
CGCCGGCCGCTATTTCGACAATACCACGCCTGTCACCGGCGGGTCGCTCTGCCAAATTGCCCGTTCGGATGCCGCCGATA
TCGAGCTCGCGCTCGATGCCGCCCATGCCGCCAAGGAGAAGTGGGGCCGGACCTCGACCACCGAGCGCTCCAACATCCTG
ATGAAGATCGCGGCGCGGATGGAGGACAATCTCGAGCTTCTGGCACGCGCCGAGACTTGGGACAACGGCAAGCCGGTCCG
CGAGACCATGGCCGCCGATATACCGCTGGCAATCGATCATTTCCGCTACTTTGCCGCCTGCATCCGTGCGCAGGAAGGCA
CGATCGGCGAGATCGACCACGATACCGTCGCCTATCATTTCCACGAGCCGCTTGGTGTCGTCGGCCAGATCATTCCGTGG
AATTTCCCGATCCTGATGGCCGCCTGGAAGGTGGCGCCGGCACTTGCCGCCGGCAACTGCGTCGTCCTGAAGCCGGCCGA
GCAGACGCCGGCATCGATCCTCATACTCGCCGAATTGATCGCCGACCTGTTGCCGCCGGGCGTGCTGAACATCGTCAACG
GCTTCGGGCTCGAAGCGGGCAAGCCGCTGGCGACCAGCCCGCGCATCGCCAAGATCGCCTTTACCGGGGAGACGACGACG
GGGCGGCTGATCATGCAATATGCCAGCCAGAACCTCATTCCCGTCACACTCGAGCTCGGCGGCAAGTCGCCGAACATCTT
CTTCGCCGACGTGCTCAATGAGGACGACGACTATTTCGACAAGGCGCTGGAAGGCTTCGCCATGTTTGCGCTCAACCAGG
GTGAGGTCTGCACCTGCCCGAGCCGGGCGCTGGTGCAGGAAAGCATCTATGACCGCTTCATGGAGCGGGCGGTGAAGCGG
GTGGAGGCGATCCGGCAGGGCAATCCGCTCGACACAACAACAATGATCGGCGCACAGGCGTCGGGCGAACAGTTGGAGAA
GATCCTCTCCTATATCGACATCGGCAAGCAGGAAGGCGCCGAGGTCCTGACCGGCGGCGGGCGCAACGTGCTCGAGGGCG
ACCTCTCGGGTGGCTACTACGTCAAGCCGACGGTCTTCCGCGGGCATAACAAGATGCGCATCTTCCAGGAGGAGATCTTC
GGCCCGGTCGTGTCGGTGACCACCTTCAAGACGGAGGACGAGGCGCTCGAGATCGCCAATGACACGCTCTACGGCCTCGG
TGCCGGCGTGTGGAGCCGCGATGCCAATCGCTGCTACCGGTTCGGCCGCGAGATCCAGGCCGGCCGCGTCTGGACCAATT
GCTACCATGCCTATCCGGCGCATGCCGCCTTCGGCGGCTACAAGCAATCGGGCATCGGCCGCGAGACGCACAAGATGATG
CTCGACCATTACCAGCAGACGAAGAATATGCTGGTGAGCTACAGCCCGAAAGCGCTCGGCTTCTTCTGA

Protein sequence :
MLHQKILDNPFKHKYGNFIGGEWREPVAGRYFDNTTPVTGGSLCQIARSDAADIELALDAAHAAKEKWGRTSTTERSNIL
MKIAARMEDNLELLARAETWDNGKPVRETMAADIPLAIDHFRYFAACIRAQEGTIGEIDHDTVAYHFHEPLGVVGQIIPW
NFPILMAAWKVAPALAAGNCVVLKPAEQTPASILILAELIADLLPPGVLNIVNGFGLEAGKPLATSPRIAKIAFTGETTT
GRLIMQYASQNLIPVTLELGGKSPNIFFADVLNEDDDYFDKALEGFAMFALNQGEVCTCPSRALVQESIYDRFMERAVKR
VEAIRQGNPLDTTTMIGAQASGEQLEKILSYIDIGKQEGAEVLTGGGRNVLEGDLSGGYYVKPTVFRGHNKMRIFQEEIF
GPVVSVTTFKTEDEALEIANDTLYGLGAGVWSRDANRCYRFGREIQAGRVWTNCYHAYPAHAAFGGYKQSGIGRETHKMM
LDHYQQTKNMLVSYSPKALGFF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 4e-142 66
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 1e-147 66
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 1e-147 66
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 1e-147 66
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 3e-147 66
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 1e-62 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SFHH103_02183 YP_005189503.1 aldehyde dehydrogenase VFG0082 Protein 2e-142 66