Gene Information

Name : SFHH103_01884 (SFHH103_01884)
Accession : YP_005189204.1
Strain : Sinorhizobium fredii HH103
Genome accession: NC_016812
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2015561 - 2017183 bp
Length : 1623 bp
Strand : +
Note : -

DNA sequence :
ATGTCGAACGCGACCCAAAATCTTCCCGATGATCCCGCCTTCCTGAAGGCGATGATCGCTGCCTTGCAGGCGGAAAATGC
GAAGATGTCGGCGACGTTGCGGGCGCACGACCAATTGATCCAGGACCTGCGGCTGCGCATCGCCAGGCTAAGGAAACAGG
CCTTCGGCAAATCCTCCGAGAAGATCGAGCGCGAAATCCAGCAATTGGAACTGGCGCTGGAGGAGCTGTTGATCGCAGCG
TCGGAGAACAGCACCAAACCAATAGACGAGGACGATGAGATCGTCCCGGAGGCGTCCACAGATCCTTCCAGGGAGAAGGT
GATCCGCAGGCGTCCACGCGTATCAGAAAAGGCCGTGCGCGAGCGCAGGGAAATCGATCCCGGCAGAGTCTGCCCCGATT
GCGGGGGAGAACTGCGCCTGGTGGGTGAAGACGCCAGCGAAATCCTCGACATGATCGCGGCGCAGATGAAGGTCATCGAG
GTCGCCCGATTGAAGAAGTCCTGCCGTTGCTGCGAGAAGATGGTGCAGTTGCCGGCGCCAAGCCGCCCGATACCGGGCAG
CATGGCAGGTGCCGGGCTTCTGGCTTACATCCTGGTCTCGAAGTTCGACGACCATCTGCCCCTCTATCGCCTGAACGAGA
TCTTCGCCCGCATGGGCGCCGACATTCCCGACAGCACGCTGGTCGATTGGTGCGGCCGCGCCATGCGGGTGCTTCAGCCT
TTGATCGAGCGGATCGAGGCGGCGATCATGGGCAGCGACCTTCTTCATGCCGACGACACCCCGATCCGGGTGCTGGATCG
TTCGCTGCGGGATAAGGGGCTGGGCAAAGGCGTGAAGAAAGGCAGGATCTGGGCCTATGTCCGCGATCAACGTCCCTGGG
CGGGTGTGGCTCCACCGGGTGCGGTCTATTACTTCGCCCCCGACTGGAAGGAAGAGCACGTCCACCGTCACCTCAAACAG
ACAAGCGGCATCCTTCAGGCTGATGGCTACAAAGGCTACGGCAAGCTGTATGACCCTGGAGGGGATGGGACATCCCGCTT
CCGTGAGGCAGCCTGCTGGGCACACNGGCGACGCGACTTCCACGATATCTGGACCTCGAATAAATCCGAGATCGCACGCG
AGGCTCTCGACCGTATCGGCGCGCTTTACGACATCGAACGTGAGATTGTGGGTCAGCCTGCCGATATCCGCCTCGCCGCG
CGTCAAAAGCACAGCAAGGCGAAAGTCGAAGCCTTGCGCGTCTGGGCCGAGGCGCAGTTGACCCGCATTCCGGGCAAGGG
CGATCTGGCGCAAGCTTTCCGCTATGGCCTGAGTCGGTGGCCATCATTCTGCCTGTTCCTGGAGGACGGCCGTGTCGCGA
TCGACAATAATGCTGCTGAGCGGGCCCTGCGCCCGGTTGGAATTGGAAGGAAAAATTGGCTCTTTGCCGGGGCAGACACC
GGTGCGGAGACACTGGCGCGTGCCATGACGATCATCGAAACGGCCAAGATGAATGGCCTCGATCCGCAGGCCTATCTGGC
CGATGTGCTCGACCGTATCCACGATCATAAGATCAATCGCCTCGACGAACTGCTCCCCTGGAATTGGTCACCTGTTGCCC
TCATCTGCGCCGAGGCGGCCTGA

Protein sequence :
MSNATQNLPDDPAFLKAMIAALQAENAKMSATLRAHDQLIQDLRLRIARLRKQAFGKSSEKIEREIQQLELALEELLIAA
SENSTKPIDEDDEIVPEASTDPSREKVIRRRPRVSEKAVRERREIDPGRVCPDCGGELRLVGEDASEILDMIAAQMKVIE
VARLKKSCRCCEKMVQLPAPSRPIPGSMAGAGLLAYILVSKFDDHLPLYRLNEIFARMGADIPDSTLVDWCGRAMRVLQP
LIERIEAAIMGSDLLHADDTPIRVLDRSLRDKGLGKGVKKGRIWAYVRDQRPWAGVAPPGAVYYFAPDWKEEHVHRHLKQ
TSGILQADGYKGYGKLYDPGGDGTSRFREAACWAHXRRDFHDIWTSNKSEIAREALDRIGALYDIEREIVGQPADIRLAA
RQKHSKAKVEALRVWAEAQLTRIPGKGDLAQAFRYGLSRWPSFCLFLEDGRVAIDNNAAERALRPVGIGRKNWLFAGADT
GAETLARAMTIIETAKMNGLDPQAYLADVLDRIHDHKINRLDELLPWNWSPVALICAEAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BCAM0248 YP_002232880.1 putative transposase Not tested BcenGI11 Protein 7e-87 41
st57 CAC81895.1 ST57 protein Not tested LEE II Protein 9e-82 41
Z4340 NP_289564.1 hypothetical protein Not tested OI-122 Protein 2e-83 41