Gene Information

Name : istb1 (SFHH103_01440)
Accession : YP_005188763.1
Strain : Sinorhizobium fredii HH103
Genome accession: NC_016812
Putative virulence/resistance : Unknown
Product : transposase for insertion sequence element IS200
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1546723 - 1547157 bp
Length : 435 bp
Strand : +
Note : -

DNA sequence :
ATGGATGAACGATCGCAATCACACGCGACGTGGGACTGCAAATACCATGTGGTCTTTTCAAGTAAGTACCGAACGAAACG
GCTTTACGGTGACGTACGGCGTGAATTGGGTGACCTTTTGCATAGGCTTGCTCTGCAAAAGGATTGCCGGATCGAGGAAG
GGCACCTTATGCCCGACCATGTGCATATGCTGATCTCGATCCCGCCGAAGTACTCGGTGTCGCACATTGTCGGCTTCCTG
AAGGGCAAGACAGCCCTTTACGTGGCCAACAAATATGCCCGCAAGCGACGCTACAAAGGCTATCACTTTTGGGCCCGTGG
GTACTTCGTCTCGGCTATGATGAGCAGGTCGTCAGACGATATATCCGTAATCAAGAAAAGGCCGACAAAGCTTCCGACTT
TGCCGACCTCTTTAACCGTAGCTACTAACTTATAG

Protein sequence :
MDERSQSHATWDCKYHVVFSSKYRTKRLYGDVRRELGDLLHRLALQKDCRIEEGHLMPDHVHMLISIPPKYSVSHIVGFL
KGKTALYVANKYARKRRYKGYHFWARGYFVSAMMSRSSDDISVIKKRPTKLPTLPTSLTVATNL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SP_1064 NP_345538.1 IS200 family transposase Not tested PPI-1 Protein 3e-21 46
tnpA NP_455584.1 transposase for insertion sequence element is200 Not tested SPI-5 Protein 9e-23 45
CPR_0382 YP_697711.1 IS1469, transposase Not tested Not named Protein 9e-21 43