Gene Information

Name : fepD (SL1344_0580)
Accession : YP_005180502.1
Strain : Salmonella enterica SL1344
Genome accession: NC_016810
Putative virulence/resistance : Virulence
Product : ferric enterobactin transport protein FepD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 652053 - 653060 bp
Length : 1008 bp
Strand : -
Note : -

DNA sequence :
ATGTCATGCTCGTTTTCCGTGACGCGCGCGTTTGCCGTGCCCGGATTGTTGTTATTACTGAGTCTCGCCGCGGTTTTAAG
CCTGGTCATTGGCGCGAAACCGCTGCCCGCCGCCGTCGTGCTGGAGGCGTTCACCGGCGTGTGCCAAAGCGCCGATTGCA
CCATCGTCCTGGATGCGCGTTTGCCGCGTACGCTGGCCGGATTACTGGCAGGCGGCGCGTTGGGCCTCGCCGGGGCGCTC
ATGCAAACACTCACTCGCAACCCGCTCGCCGACCCGGGGATTCTGGGCGTTAACAACGGCGCCAGCTTCGCCATTGTACT
GGGCGCGGCGCTGTTTGGTTTCTCCACGCCGCTGGAACAGCTTTTCATGGCATTTAGCGGCGCGCTTATCGCATCACTGA
TTGTCGCCTTCACCGGTAGTCAGGGCGGCGGCCAGTTAAGCCCGGTCCGCCTGACACTGGCGGGCGTGGCGCTTGGCGCG
GTACTGGAAGGATTGACCAGCGGCATCGCGCTGTTAAATCCAGAGGTTTATGATCAGCTTCGCTTCTGGCAGGCGGGATC
GCTGGACATTCGTAGCCTGCAAACGTTGAAAGTCGCGCTTGCGCCCGTGGTTATCGCTGGGATCGTGGCGCTATTTCTGA
GCCGTGCGCTGAATAGCCTGAGCCTCGGCAGCGATACTGCGACGGCGCTGGGGAGTAAAGTGGCGCGCACCCAACTTATC
GGTTTACTGGCGATTACCGTCTTGTGCGGCAGCGCAACGGCGCTGGTCGGCCCTATCGCCTTTATTGGTCTGATGATGCC
GCATATGGCGCGTTGGCTGGTGGGCGCAGACCACCGTTGGTCGCTGCCGGTAACACTACTGGCAACCCCTGCTCTGCTGC
TTTTTGCCGATATTATTGGTCGTCTGTTAGTGCCGGGCGAACTCCGCGTATCGGTCGTCAGTGCGTTTATCGGCGCGCCG
GTACTTATCTTTCTGGTACGCCGTAAATCGAGCGGAGGCGGCCTGTGA

Protein sequence :
MSCSFSVTRAFAVPGLLLLLSLAAVLSLVIGAKPLPAAVVLEAFTGVCQSADCTIVLDARLPRTLAGLLAGGALGLAGAL
MQTLTRNPLADPGILGVNNGASFAIVLGAALFGFSTPLEQLFMAFSGALIASLIVAFTGSQGGGQLSPVRLTLAGVALGA
VLEGLTSGIALLNPEVYDQLRFWQAGSLDIRSLQTLKVALAPVVIAGIVALFLSRALNSLSLGSDTATALGSKVARTQLI
GLLAITVLCGSATALVGPIAFIGLMMPHMARWLVGADHRWSLPVTLLATPALLLFADIIGRLLVPGELRVSVVSAFIGAP
VLIFLVRRKSSGGGL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fagA YP_005682399.1 hypothetical protein Virulence PiCp 1 Protein 2e-32 46
fagA YP_003782432.1 integral membrane protein Virulence PiCp 1 Protein 2e-32 46
fagA YP_005684490.1 hypothetical protein Not tested PiCp 1 Protein 2e-32 46
fagA YP_005680309.1 hypothetical protein Not tested PiCp 1 Protein 2e-32 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fepD YP_005180502.1 ferric enterobactin transport protein FepD VFG0926 Protein 9e-102 89