Gene Information

Name : treC (SL1344_4384)
Accession : YP_005184248.1
Strain : Salmonella enterica SL1344
Genome accession: NC_016810
Putative virulence/resistance : Unknown
Product : trehalose-6-phosphate hydrolase
Function : -
COG functional category : -
COG ID : -
EC number : 3.2.1.93
Position : 4715683 - 4717335 bp
Length : 1653 bp
Strand : -
Note : -

DNA sequence :
ATGACTATTCCCCTCTGGTGGCAAAACGGCGTTATTTATCAGATCTACCCAAAAAGTTTTCAGGACACGACCGGCAGCGG
CACCGGCGATTTACGCGGCGTCACGCAGCGCCTTGACTATCTACAGCGACTCGGCGTGGACGCCATCTGGCTCACGCCGT
TTTATATCTCGCCGCAGGTGGATAACGGTTATGACGTCGCAAATTATACGGCTATCGACCCGACCTACGGCACGCTGGAT
GATTTTGACGAGCTGGTCGCGCAGGCGAAAGCACGCGGTATTCGTATCATCCTGGATATGGTGTTTAACCATACTTCTAC
CCAGCACGCCTGGTTTCGCGAAGCGCTGAACAAAGAGAGTCCATACCGTCAGTTTTATATCTGGCGCGATGGCACGCCGG
ATGTCTGCCCGAATAACTGGCAATCCAAATTTGGCGGCAGCGCCTGGCGCTGGCATAGCCAGAGCGAACAATATTATTTA
CACCTTTTCGCGCCTGAACAGGCCGACCTGAACTGGGAAAACCCCGCCGTACGCGCCGAGCTGAAAAAGGTCTGCGAATT
CTGGGCCGATCGCGGCGTGGATGGCCTGCGTCTGGACGTGGTGAACCTGATCGCCAAAGATCAGAATTTTCCTGACGATC
CGACGGGCGACGGACGCCGCTTTTATACCGACGGGCCGCGCGCGCATACGTTTTTACGCGAAATGAACCGTGACGTTTTT
ACGCCGCGTAATCTGATGACGGTAGGCGAAATGTCCTCTACCACGCTGGAAAACTGCCAGCAATATGCCGCGCTTAGCGG
CGACGAACTCTCGATGACCTTCAATTTTCATCATCTGAAGGTGGATTACCCCAATGGCGAAAAGTGGACGCTGGCAAAAC
CTGATTATGTGGCGCTGAAAGCGTTGTTCCGCCACTGGCAACAGGGGATGCATAACGTCGCCTGGAACGCGTTATTCTGG
TGTAATCACGATCAGCCGCGCATCGTTTCCCGCTTTGGCGACGAGGGTGAATACCGGGTTCCAGCCGCGAAAATGTTGGC
GATGGCGCTGCACGGTATGCAAGGGACGCCTTATATCTATCAGGGCGAAGAAATCGGCATGACCAACCCACACTTTACCC
GCATCACCGATTATCGCGACGTGGAAAGCCATAACATGTTTGCCGCGCTACGCGCCGCCGGGCGCGACCCCGACGAACTG
CTGGCTATTCTGGCCAGTAAATCCCGCGACAACAGCCGCACGCCGATGCAATGGGACAACGGTAAAAACGCCGGTTTCAC
CCAAGGCGAGCCGTGGATAAGCCTGTGCGATAACTATACGGAGGTTAACGTCGAGGCGGCATTACGCGATGAAAACTCGG
TGTTTTACACCTATCAAAAGCTGATTGCGCTACGTAAAACCCAGCCTGTACTGATCTGGGGCGATTATCAGGATCTCCTC
CCGGATAGCCCATCAGTATGGTGTTATCGCCGCCAGTGGCAGGGGCAAATCCTGCTGGTTGTCGCCAATCTGAGTAACCA
GTGCCAGGAGTGGCATCCGCCGCATATCAAAGGACAGTGGCAGGCGCTACTGCATAATTATGGCGAGGTCGCCAGCCAGC
CAGCCGCGATGACGCTCCGCCCATTTGAAGCCATCTGGTGGTTACAACGCTAA

Protein sequence :
MTIPLWWQNGVIYQIYPKSFQDTTGSGTGDLRGVTQRLDYLQRLGVDAIWLTPFYISPQVDNGYDVANYTAIDPTYGTLD
DFDELVAQAKARGIRIILDMVFNHTSTQHAWFREALNKESPYRQFYIWRDGTPDVCPNNWQSKFGGSAWRWHSQSEQYYL
HLFAPEQADLNWENPAVRAELKKVCEFWADRGVDGLRLDVVNLIAKDQNFPDDPTGDGRRFYTDGPRAHTFLREMNRDVF
TPRNLMTVGEMSSTTLENCQQYAALSGDELSMTFNFHHLKVDYPNGEKWTLAKPDYVALKALFRHWQQGMHNVAWNALFW
CNHDQPRIVSRFGDEGEYRVPAAKMLAMALHGMQGTPYIYQGEEIGMTNPHFTRITDYRDVESHNMFAALRAAGRDPDEL
LAILASKSRDNSRTPMQWDNGKNAGFTQGEPWISLCDNYTEVNVEAALRDENSVFYTYQKLIALRKTQPVLIWGDYQDLL
PDSPSVWCYRRQWQGQILLVVANLSNQCQEWHPPHIKGQWQALLHNYGEVASQPAAMTLRPFEAIWWLQR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
malL YP_251987.1 oligosaccharide alpha-1,6-glucosidase Not tested SCCmec Protein 3e-124 45