Gene Information

Name : yjcC (SL1344_4200)
Accession : YP_005184065.1
Strain : Salmonella enterica SL1344
Genome accession: NC_016810
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4523673 - 4525274 bp
Length : 1602 bp
Strand : +
Note : -

DNA sequence :
ATGAGTCAAAGCACACGACGCAAGGTGTTGAGATTTCTCGGAACGATCATTGTGGTGTTACTTCCTATATTGCTGGCGAT
CTGGTTTGCTCATATCCGGGCAGTCTCTGAAACCAGAAATCAGTTACATTCATTTGCGCAGTTGGTATTAGATAAAACGG
AGCGGGTTATCCTGCAAGCAGATTTAGCCCGCGATGCCGCTGAACAATATCAGGGGCAAGCCTGTACGCCAGCCCATCAA
CAGCGAATGCTGAATATTATCCGCGGTCGTTTGTACATTAATGAGTTGATTTATGCTAAGGGCCAGCGTTTTCTATGCTC
TACGGTTATGACGCCAACAAGTCCTTATTTTATTCCCCGCGCTGACTATAAACGAAAGCCTGACATCGCTATTTATTACT
ATCGTGATACGCCTTTTTTCAACGGTTATAAAATGACATATATGCAGCGGGGAAACTATGTCGCGGTTATCAATCCCTTA
TCTTATAGCGAGGTGATGTCAGACGATCCGGCGTTGGCCTGGGGAATGTATGATACGGTGACCAACACCTTTTTCTCCCT
GAGTGAACAGGCGCAGGCTGATCAGCTATTACCTTTGGTACGACGGAGTGAACCTGTGTTCCAACAGGGTGAGCGTTTTT
ATACTCTGGTTAAATCAGCAAAACGACCGGTTGCCGCGATTGTGTCAACCTCAAAGCAACGCTTTTACCAGAACCTCTTT
CATCAGCTTACGTTAACGCTACCGTTAGGGATCATCTGTAGCATTATCATCTTATTTATGTGGTCACGATCCCGGCAGGC
ATATTACTCACCGCGTCGATTGCTGCAACGGGCCATTACCAGGCACCAGCTTTGCCTTCATTATCAGCCGATCATTGATA
TCCGAAACGGGACATGTGTAGGTGCCGAAGCGCTATTGCGTTGGCCGGGCTATCACGGTCCGGTGATGAGCCCGTGCGAA
TTTATTCCGCTGGCGGAAAAAGAGGGGATGATTGAGCAGATCACCGATTATGTCGTCGAAGAGGTATTTAATGATTTAGG
TGGTTTTCTGGCCGCGCACCCGCATCTTTATGTCTCTATCAATCTCGCTGCCGCCGATTTTCTCTCTTCCCGACTAATTG
TGATGATTCATGAAAAAACGCGTCAGCATTCAGTGCTTGCGCAACAGATAAAGGTTGAAGTGACTGAGCGCGGATTTATT
GATGTGCCTAAAATGACGCCGATTATTCAGGCGTTTCGCCAGGCGGGATACGAGGTGGCAATTGATGACTTTGGTACCGG
CTATTCGAACTTGCATAACCTGTACTCATTAAATATCGACCTTTTAAAAATTGATAAATCTTTTGTCGACACGCTAACCA
CTAATAGCGCCAGCCATTTGATTGTGGAACATATTATTGAAATGGCGCAAAGTTTGCGGCTAAAAATCATTGCTGAGGGG
GTTGAAACGGCTGAACAGGTTAGCTGGTTGCTAAAACGCGGCGTTCAGTATTGTCAGGGATGGCACTTTGCGAAGGCGTT
ACCACCGCAGGAATTCATCGCCTGGCTACAACAAACGCCCGCGCCTCTGACGATACGCGGGCAGACGCCCTACAGGCGGT
GA

Protein sequence :
MSQSTRRKVLRFLGTIIVVLLPILLAIWFAHIRAVSETRNQLHSFAQLVLDKTERVILQADLARDAAEQYQGQACTPAHQ
QRMLNIIRGRLYINELIYAKGQRFLCSTVMTPTSPYFIPRADYKRKPDIAIYYYRDTPFFNGYKMTYMQRGNYVAVINPL
SYSEVMSDDPALAWGMYDTVTNTFFSLSEQAQADQLLPLVRRSEPVFQQGERFYTLVKSAKRPVAAIVSTSKQRFYQNLF
HQLTLTLPLGIICSIIILFMWSRSRQAYYSPRRLLQRAITRHQLCLHYQPIIDIRNGTCVGAEALLRWPGYHGPVMSPCE
FIPLAEKEGMIEQITDYVVEEVFNDLGGFLAAHPHLYVSINLAAADFLSSRLIVMIHEKTRQHSVLAQQIKVEVTERGFI
DVPKMTPIIQAFRQAGYEVAIDDFGTGYSNLHNLYSLNIDLLKIDKSFVDTLTTNSASHLIVEHIIEMAQSLRLKIIAEG
VETAEQVSWLLKRGVQYCQGWHFAKALPPQEFIAWLQQTPAPLTIRGQTPYRR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
yjcC YP_219130.1 diguanylate cyclase/phosphodiesterase Not tested SPI-4 Protein 0.0 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
yjcC YP_005184065.1 hypothetical protein VFG0584 Protein 0.0 100