|
Name : ribD (SL1344_0410) Accession : YP_005180336.1 Strain : Salmonella enterica SL1344 Genome accession: NC_016810 Putative virulence/resistance : Unknown Product : riboflavin biosynthesis protein RibD Function : - COG functional category : - COG ID : - EC number : - Position : 469330 - 470433 bp Length : 1104 bp Strand : + Note : - DNA sequence : ATGCAGGATGAGTTTTACATGGCGCGAGCGCTCAAACTGGCGCAGCGTGGACGTTTCACCACTCACCCTAACCCTAATGT CGGCTGTGTCATTGTTAACAATGGCGACATCGTCGGCGAAGGTTATCACCATCGCGCCGGAGAGCCGCACGCCGAGGTTC ATGCGCTGCGGATGGCGGGCGCAAAAGCCAAAGGCGCAACCGCCTATGTCACGCTTGAACCCTGTAGCCATCATGGGCGA ACGCCGCCATGTTGCGATGCGCTGATTGCGGCCGGCGTCGCGCGCGTGGTCGCCGCGATGCAGGACCCGAACCCACAGGT CGCCGGGCGTGGGCTGTATCGCCTGCAACAGGCGGGTATTGCGGTCAGCCACGGGTTAATGATGAGTGAAGCGGAGGCGC TCAATAAAGGCTTCCTCAAGCGGATGCGTACCGGATTCCCTTATCTTCAGCTTAAACTGGGCGCCTCCGTCGACGGACGG ACGGCGATGGCCAGCGGCGAAAGCCAGTGGATCACCTCGCCGCAGGCCCGGCGTGACGTTCAGCGCTTGCGTGCGCAAAG CCACGCTATCTTAACCAGTAGCGCGACGGTATTGGCTGACGATCCGGCCTTGACGGTGCGTTGGGCGGAGTTAGACGCCT CTACGCAGGCGTCTTACCCGCAGGAAAATCTGCGCCAGCCGGTGCGAATTGTTATCGACAGCCAAAACCGGGTAACGCCT GCGCATCGTATTGTGCAGCAGCCTGGCGAAACGTGGATCGCGCGTACCCAGGAAGATAGCCGCGCGTGGCCCGATGCGGT TCGTACTATCAGCGTGCCGGCGCACAACGGACATTTGGATCTGGTTGTGCTGATGATGCAGTTAGGCAGGCAGCAGATTA ATAGCATATGGGTTGAAGCCGGACCGGGACTGGCGGGCGCGTTGCTGCAAGCCGGGCTGGTGGATGAACTGATTGTCTAT GTCGCGCCTAAATTGTTGGGAACCCAGGCGCGGGGATTATGCGAATTGCCGGGGCTTGAGAAGCTCGCCGACGCGCCGCA ATTTACCTTCAGCGAAATACGTCATGTCGGCCCGGATGTTTGCCTGCATATGGTGAGCGCATGA Protein sequence : MQDEFYMARALKLAQRGRFTTHPNPNVGCVIVNNGDIVGEGYHHRAGEPHAEVHALRMAGAKAKGATAYVTLEPCSHHGR TPPCCDALIAAGVARVVAAMQDPNPQVAGRGLYRLQQAGIAVSHGLMMSEAEALNKGFLKRMRTGFPYLQLKLGASVDGR TAMASGESQWITSPQARRDVQRLRAQSHAILTSSATVLADDPALTVRWAELDASTQASYPQENLRQPVRIVIDSQNRVTP AHRIVQQPGETWIARTQEDSRAWPDAVRTISVPAHNGHLDLVVLMMQLGRQQINSIWVEAGPGLAGALLQAGLVDELIVY VAPKLLGTQARGLCELPGLEKLADAPQFTFSEIRHVGPDVCLHMVSA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00289 | YP_008207754.1 | Pyrimidine deaminase | Not tested | AbaR25 | Protein | 3e-57 | 45 |
| BJAB0868_00293 | YP_008211619.1 | Pyrimidine deaminase | Not tested | AbaR26 | Protein | 3e-57 | 45 |
