Gene Information

Name : SL1344_2754 (SL1344_2754)
Accession : YP_005182644.1
Strain : Salmonella enterica SL1344
Genome accession: NC_016810
Putative virulence/resistance : Unknown
Product : putative transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2933553 - 2934419 bp
Length : 867 bp
Strand : +
Note : -

DNA sequence :
ATGAAGTATGTCTTCATCGAAAAACATCAGGCTGAGTTCAATATCAAAGCCATGTGCCGTGTATTTCAGGTTGCCCGTAG
CGGCTGGTACGTCTGGCATCAGCGTCGTCATCAGATAAACCGGCGTCAGCGGTTCCGCCTTGTCTGTGATAACGTCGTCC
GGGAAGCATTCAGTGACGCAAAACAACGCTATGGTGCGCCACGCCTGACGGATGAGCTTCGTGCTCAGGGTTACCAGTTC
AACGTGAAAACCGTGGCGGCCAGCCTGCGTCGGCAGGGGCTGCGGGCGAAAGCCTCGCGCCGGTTCCGTCCGGTCAGTTA
CCGCAAACATGGTCTGCCAGTCTCAGAGAATCTGCTGAAGCAGGACTTTTACGCCAGCGGCCCGAATCAGAAGTGGGTGG
GTGACATCACGTATCTTCGCACTGGTGAAGGCTGGCTTTATCTGGCCGTGGTTATCGATCTGTGGCCGCGGTCAGTCATT
GGCTGGTCGATGTCCTCGCGGATGACAGCACAGCTTGCCTGCAATGCGTTACAGATGGCGCTGTGGCAGCGTAAATGTCC
GGAAAATGTCATCGTGCATACAGACAGAGGCGGTCAGTACTGTTCAACGGATTACCAGAGCTTACTGAAACGCCATAATC
TGCGGGGAAGTATGAGCGCCAGAGGTTGTTGTTACGACAATGCCTGTGCGGAAAGCTTCTTCCATACGCTGAGGGTGGAA
TGTATCCACGGAGAGGACTTTGTCAGCCGGGAAATAATGCGGACAGCAGTGTTTAATTATAGTGAGTGTGATTACAATCG
GTGGCGTCGTCACAGTGCCTGTGGCGGTCTCAGTCCGGAACAATTTGAAAACCAGAACCTCGCTTAG

Protein sequence :
MKYVFIEKHQAEFNIKAMCRVFQVARSGWYVWHQRRHQINRRQRFRLVCDNVVREAFSDAKQRYGAPRLTDELRAQGYQF
NVKTVAASLRRQGLRAKASRRFRPVSYRKHGLPVSENLLKQDFYASGPNQKWVGDITYLRTGEGWLYLAVVIDLWPRSVI
GWSMSSRMTAQLACNALQMALWQRKCPENVIVHTDRGGQYCSTDYQSLLKRHNLRGSMSARGCCYDNACAESFFHTLRVE
CIHGEDFVSREIMRTAVFNYSECDYNRWRRHSACGGLSPEQFENQNLA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ECO111_3732 YP_003236068.1 putative IS3 transposase InsF Not tested LEE Protein 6e-110 85
unnamed AAL57581.1 transposase 1 Not tested LEE Protein 7e-111 85
unnamed AAL57519.1 transposase 1 Not tested LEE Protein 3e-111 85
insF CAC43414.1 transposase of insertion element IS3 Not tested PAI III 536 Protein 2e-106 81
tnpA1133 ACK44540.1 TnpA Not tested SGI1 Protein 4e-43 41
orfB AGK07032.1 IS1133 transposase; OrfB Not tested SGI1 Protein 4e-43 41
orfB AGK07090.1 IS1133 transposase; OrfB Not tested SGI1 Protein 4e-43 41
c3575 NP_755450.1 transposase insF Not tested PAI I CFT073 Protein 2e-42 41
unnamed AAQ07468.1 TnpI-like protein Not tested Not named Protein 2e-42 41
hp1 AAC61713.1 Hp1 Not tested PAI I CFT073 Protein 2e-42 41
unnamed AAF09030.1 unknown Not tested SHI-O Protein 2e-42 41
tnpI AAD44751.1 TnpI Not tested SHI-2 Protein 2e-42 41
unnamed AAB86997.1 hypothetical 31 KD protein Not tested SHI-1 Protein 2e-42 41
Z1134 NP_286669.1 hypothetical protein Not tested TAI Protein 2e-42 41
unnamed AAF09022.1 unknown Not tested SHI-O Protein 6e-43 41
Z1573 NP_287077.1 hypothetical protein Not tested TAI Protein 2e-42 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SL1344_2754 YP_005182644.1 putative transposase VFG1631 Protein 1e-106 81
SL1344_2754 YP_005182644.1 putative transposase VFG1706 Protein 1e-42 41