Gene Information

Name : sciC (SL1344_0262)
Accession : YP_005180197.1
Strain : Salmonella enterica SL1344
Genome accession: NC_016810
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 306714 - 308597 bp
Length : 1884 bp
Strand : -
Note : -

DNA sequence :
ATGGATCCACGGCTACTGGAGTATTACAACCGCGAACTGAGCTACCTGCGGGAGACCGGTGCTGAGTTCGCCACCCTCCA
TCCCAAAATTGCCGCCCGACTGGGGATGCAGGGAACCGATATTGCCGACCCGTATGTGGAACGCATGATCGAGGCGTTCA
GCTTTCTGAGCGCCCGCACTCAGCTAAAAATTGACGCCGAGTTTCCCCGCTTCACACAGCGGTTACTGGAAGTCGTCAGC
CCCAATTACGTCACCCCCACGCCATCGATGGCAGTGGTAAAGCTGTATCCCGATACGCAGGAAGGCGACCTGGCGAAAGG
GGTCACCGTGCCGCGCGATACCGCGTTCGTTTCCCCCATCCCGGAAGGCGAAAATACCGCCTGCCAGTTTCGCAGCAGCC
AGGACGTCACGCTGTGGCCGCTGTCCATCGAGGAGGTACGCCTGACCGCCGCGCCGCCGGATATGCCCGCCCTGCACCGC
TATCTGCCGCCTAATATTCATGTCGCCGGGGCATTGCGCATCACCCTGCGAACCTTCGGGGAACTGACTTTCAGCGAGCT
GGCCGGTCCGGCACGGCTGCCCTTTTACCTCTGCGGCGAAGAACGCATTGCGTCACACCTGTTTGAGCTGCTACATACCA
GCGCCGTCGCCACACTGGCCGGTGAACCCGGTCACTTTGACGGCGAACTGAATGTGAATCTTCAACACCCGGTGGCGCAC
GAAGGGCTGGAGCCAGGGCAGGGGCTGCTACCGCTCGCCTGGAACGTGTTTCACGGCCATAATCTGCTGCATGAATTTTT
CGCCTGTCCGGAACGGTTTTACTTCTTCACCCCGACCGGATTGTCTGCCGGGTTACAAAAGGTGCAGGGCAATGTGGCGG
AAATTGTCATACTGCTTAACCGCCTGCCGCCGGACTGGCTGATTCATCAGACGGACGCTGCACAGTTCAGCCTGTTCTGT
ACGCCGGTGATCAACCTGCTTCCTCGCACCACCACCCGGATTGAAGTCACTCACAGCGTGACGGAACAGCATCTGGTGGT
GGATCGTACCCGTCCGCTGGATTACGAGGTGTTTTCTGTTCAGGAAGTCGAAGGCCTGGAAGCGGAAACCACACGGAAGA
TGATTTTTCGTCCGCTGTATCACACCCGTAATAATGACGAAGGCAACCACGGGCGTTATTTTTCACTGCGTCGTGAACCG
CGCCGCTCGTCAGAAAACGCCCGCCGCTATGGCACCCGAACCCCCTATACCGGCTCGGAAGTCTTCCTCTCGCTGGTTGA
TCAGCATGAAGCGCCCTACCCGGAAAATCTGCGCCATATCACCGTCACGGCAATGGTGACTAACCGCGATCTGCCCTGCC
TTATTCCACGTAATGGCCGGGATGATCTGACCGTAGATGCGGCGATTCCGGTGGCGGGCGTGGGTCTTATCAGACCGCCG
CGCCCGCCGCAGCCGCCGCTGGCTGAACGCGAAATGGCCTGGCGGCTGATCCGGCAGTTGTCGTTTAATTATCTGCCGCT
GGCCGATCTGGATCACCGCACCGGCGGCCAGGCGCTGCGCGATCTGCTGAATCTGTTTATCCCGGCTCACGACAGCCCGC
AGTCGCGCCAGGTGCGCAGCCTGATTGGCTGCAAAACCACCCCGGTGACCCGCCGCCTGCCCGGCTCCGGCCTGTTGGTC
TATGGCCGGGGCGTCAGTTGCGAACTGACCGTGGACGAAGAAGGATTTTCCGGTATCAGTCCTTACCTGTTCGGTCTGGT
GCTGGAACACTATATTGCCCGCCATGTTTCCATTAATACCTTCTCGCAGATGACGCTGCACTCGATGCAACGCGGGCATG
TCATGACCTGGCCGGTCAGAACCGGGCAACGGGGGAGCGTATGA

Protein sequence :
MDPRLLEYYNRELSYLRETGAEFATLHPKIAARLGMQGTDIADPYVERMIEAFSFLSARTQLKIDAEFPRFTQRLLEVVS
PNYVTPTPSMAVVKLYPDTQEGDLAKGVTVPRDTAFVSPIPEGENTACQFRSSQDVTLWPLSIEEVRLTAAPPDMPALHR
YLPPNIHVAGALRITLRTFGELTFSELAGPARLPFYLCGEERIASHLFELLHTSAVATLAGEPGHFDGELNVNLQHPVAH
EGLEPGQGLLPLAWNVFHGHNLLHEFFACPERFYFFTPTGLSAGLQKVQGNVAEIVILLNRLPPDWLIHQTDAAQFSLFC
TPVINLLPRTTTRIEVTHSVTEQHLVVDRTRPLDYEVFSVQEVEGLEAETTRKMIFRPLYHTRNNDEGNHGRYFSLRREP
RRSSENARRYGTRTPYTGSEVFLSLVDQHEAPYPENLRHITVTAMVTNRDLPCLIPRNGRDDLTVDAAIPVAGVGLIRPP
RPPQPPLAEREMAWRLIRQLSFNYLPLADLDHRTGGQALRDLLNLFIPAHDSPQSRQVRSLIGCKTTPVTRRLPGSGLLV
YGRGVSCELTVDEEGFSGISPYLFGLVLEHYIARHVSINTFSQMTLHSMQRGHVMTWPVRTGQRGSV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0289 NP_454871.1 hypothetical protein Not tested SPI-6 Protein 0.0 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
sciC YP_005180197.1 hypothetical protein VFG2074 Protein 2e-113 41