Gene Information

Name : ssaJ (SL1344_1343)
Accession : YP_005181253.1
Strain : Salmonella enterica SL1344
Genome accession: NC_016810
Putative virulence/resistance : Virulence
Product : putative pathogenicity island lipoprotein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1447129 - 1447878 bp
Length : 750 bp
Strand : +
Note : -

DNA sequence :
ATGAAGGTTCATCGTATAGTATTTCTTACTGTCCTTACGTTCTTTCTTACGGCATGTGATGTGGATCTTTATCGCTCATT
GCCAGAAGATGAAGCGAATCAAATGCTGGCATTACTTATGCAGCATCATATTGATGCGGAAAAAAAACAGGAAGAGGATG
GTGTAACCTTACGTGTCGAGCAGTCGCAGTTTATTAATGCGGTTGAGCTACTTAGACTTAACGGTTATCCGCATAGGCAG
TTTACAACGGCGGATAAGATGTTTCCGGCTAATCAGTTAGTGGTATCACCCCAGGAAGAACAGCAGAAGATTAATTTTTT
AAAAGAACAAAGAATTGAAGGAATGCTGAGTCAGATGGAGGGCGTGATTAATGCAAAAGTGACCATTGCGCTACCGACTT
ATGATGAGGGAAGTAACGCTTCTCCGAGCTCAGTTGCCGTATTTATAAAATATTCACCTCAGGTCAATATGGAGGCCTTT
CGGGTAAAAATTAAAGATTTAATAGAGATGTCAATCCCTGGGTTGCAATACAGTAAGATTAGTATCTTGATGCAGCCTGC
TGAATTCAGAATGGTAGCTGACGTACCCGCGAGACAAACATTCTGGATTATGGACGTTATCAACGCCAATAAAGGGAAGG
TGGTGAAGTGGTTGATGAAATACCCTTATCCGTTGATGTTATCGTTGACAGGACTGTTATTAGGAGTGGGCATCCTGATC
GGCTATTTTTGCCTGAGACGCCGTTTTTGA

Protein sequence :
MKVHRIVFLTVLTFFLTACDVDLYRSLPEDEANQMLALLMQHHIDAEKKQEEDGVTLRVEQSQFINAVELLRLNGYPHRQ
FTTADKMFPANQLVVSPQEEQQKINFLKEQRIEGMLSQMEGVINAKVTIALPTYDEGSNASPSSVAVFIKYSPQVNMEAF
RVKIKDLIEMSIPGLQYSKISILMQPAEFRMVADVPARQTFWIMDVINANKGKVVKWLMKYPYPLMLSLTGLLLGVGILI
GYFCLRRRF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssaJ NP_460374.1 needle complex inner membrane lipoprotein Virulence SPI-2 Protein 2e-106 100
ssaJ CAA12196.1 SsaJ Virulence SPI-2 Protein 4e-86 100
ssaJ CAA70532.1 secretion system apparatus Virulence SPI-2 Protein 1e-106 100
ssaJ YP_216417.1 secretion system apparatus protein SsaJ Virulence SPI-2 Protein 6e-105 99
ssaJ NP_456119.1 putative pathogenicity island lipoprotein Virulence SPI-2 Protein 2e-105 99
ssaJ NP_805080.1 pathogenicity island lipoprotein Virulence SPI-2 Protein 2e-105 99
YPO0263 YP_002345344.1 type III secretion system apparatus lipoprotein Virulence Not named Protein 3e-50 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ssaJ YP_005181253.1 putative pathogenicity island lipoprotein VFG0510 Protein 8e-107 100