Gene Information

Name : HIB_04740 (HIB_04740)
Accession : YP_005178504.1
Strain : Haemophilus influenzae 10810
Genome accession: NC_016809
Putative virulence/resistance : Virulence
Product : putative periplasmic chelated iron binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 481806 - 482687 bp
Length : 882 bp
Strand : -
Note : -

DNA sequence : 
ATGCGAAATTCATTCAAAATTATGACCGCACTTGCACTTGGTTTATTTGCAATGCAAGCTAATGCAAAATTCAAAGTTGT
TACCACCTTCACCGTGATTCAAGATATTGCACAAAATGTGGCGGGTGATGCAGCTACAGTGGAATCTATCACCAAACCCG
GTGCTGAAATTCACGAATATGAACCCACTCCAAAAGATATTGTAAAAGCACAATCTGCCGATTTAATTTTATGGAACGGC
TTAAATTTAGAACGTTGGTTTGAGCGTTTCTTCCAAAATGTTAAAGATAAACCTGCTGTGGTAGTAACAGAAGGTATTCA
ACCATTATCTATTTATGAAGGCCCGTATAAAGATGCGCCTAATCCACACGCGTGGATGTCGCCATCGAATGCATTAATTT
ATATTGAAAATATTAAAAATGCGTTAGTGAAATACGATCCACAAAATGCAGCAGTGTACGAAAAAAATGCCGCTGACTAT
GCTCAAAAAATTAAACAACTTGATGAGCCACTTCGTGCAAAATTAGCACAGATTCCAGAAGCGCAACGCTGGCTTGTAAC
AAGTGAAGGTGCTTTCAGTTATTTGGCGAAAGATTACAACTTAAAAGAAGGTTATTTATGGCCAATCAATGCTGAACAAC
AAGGCACACCACAACAAGTGCGTAAAGTGATTGATTTAGTTCGTAAAAACAATATTCCTGTTGTGTTTAGTGAAAGTACA
ATTTCAGCCAAACCTGCACAACAAGTAGCTAAAGAAAGTGGTGCAAAATACGGTGGCGTATTGTACGTTGATTCACTTTC
TGCGAAAAACGGCCCTGTGCCAACTTATATTGATTTGCTTAACGTCACCGTATCAACCATTGTTAAAGGATTCGGAAAAT
AA

Protein sequence : 
MRNSFKIMTALALGLFAMQANAKFKVVTTFTVIQDIAQNVAGDAATVESITKPGAEIHEYEPTPKDIVKAQSADLILWNG
LNLERWFERFFQNVKDKPAVVVTEGIQPLSIYEGPYKDAPNPHAWMSPSNALIYIENIKNALVKYDPQNAAVYEKNAADY
AQKIKQLDEPLRAKLAQIPEAQRWLVTSEGAFSYLAKDYNLKEGYLWPINAEQQGTPQQVRKVIDLVRKNNIPVVFSEST
ISAKPAQQVAKESGAKYGGVLYVDSLSAKNGPVPTYIDLLNVTVSTIVKGFGK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitA NP_806464.1 iron transporter periplasmic-binding protein Virulence SPI-1 Protein 2e-94 68
sitA NP_461782.1 periplasmic binding protein Virulence SPI-1 Protein 2e-94 68
sitA AAD41065.1 SitA Virulence centisome 63 pathogenicity island Protein 1e-94 68
sitA YP_217781.1 iron transporter: fur regulated Virulence SPI-1 Protein 2e-94 68
sitA NP_457255.1 Iron transport protein, periplasmic-binding protein Virulence SPI-1 Protein 2e-94 68

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HIB_04740 YP_005178504.1 putative periplasmic chelated iron binding protein BAC0439 Protein 2e-102 75
HIB_04740 YP_005178504.1 putative periplasmic chelated iron binding protein BAC0349 Protein 7e-95 68

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HIB_04740 YP_005178504.1 putative periplasmic chelated iron binding protein VFG0525 Protein 6e-95 68