Gene Information

Name : HIB_04720 (HIB_04720)
Accession : YP_005178502.1
Strain : Haemophilus influenzae 10810
Genome accession: NC_016809
Putative virulence/resistance : Virulence
Product : putative ABC-type chelated iron transport system, permease component
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 480034 - 480882 bp
Length : 849 bp
Strand : -
Note : -

DNA sequence : 
ATGTTAGATTTATTGCTCGAACCTTTTTCCTATGATTATATGCTCAAGGCGATGATTTTGAGTACCGCAGTGGGTGCTAT
TTGTGCGTTTTTGTCTTCATATTTAATGCTTAAAGGCTGGTCTTTGATTGGCGATGCGCTTTCTCATTCCGTTGTACCTG
GTGTTGCAATTGCCTATGCTTTTGCGTTGCCTTATGCACTTGGTGCATTTTTTGCAGGTATTTTTGCCGCACTTTCTATT
CTTTGGATTAAATCCATTTCTAAACTGAAAGAAGATGCCATTATCGGGTTTATTTTCAGTACTTTCTTTGCATTAGGTTT
GTTAATCGTTTCTTTAAATCCAACCGCAGTAAATGTGCACAATATCATTTTAGGTAATATTTTAGGCATTGCTGATGAAG
ATATTTACCAAGTCGCAATTATTATCGGTGTTTGTTTAGTATTGCTTTTATTGTTCTGGAAAGACTTACTACTGATTTTT
TTTGATGAAACACAGGCAAGAACAGTAGGGCTTTCGCCATTATTTTATAAGGTTTTATTTTTTACTTTATTAAGTGCTTG
TGTGGTAGCTGCATTGCAAACTGTGGGGGCGATTTTAGTCATTGCAATGGTCATTACCCCTGGTGCAACAGCATATTTAC
TCACTGATAAATTCAAAACTTTGTCAATCATCGCTATTATTTTGGGTGCAGTGACAAATTTTGTTGGGGTCTATATTAGC
TATTATTTAGACGGTGCCACTGGCGGTGTGATTGTGACCTTGCAAACATTATTGTTTTTAGTCGCTTTCTTATTTTCACC
AAAATATGGCTTACTCACACGTAATAAAAAGGCGGTAGAAAATGTTTGA

Protein sequence : 
MLDLLLEPFSYDYMLKAMILSTAVGAICAFLSSYLMLKGWSLIGDALSHSVVPGVAIAYAFALPYALGAFFAGIFAALSI
LWIKSISKLKEDAIIGFIFSTFFALGLLIVSLNPTAVNVHNIILGNILGIADEDIYQVAIIIGVCLVLLLLFWKDLLLIF
FDETQARTVGLSPLFYKVLFFTLLSACVVAALQTVGAILVIAMVITPGATAYLLTDKFKTLSIIAIILGAVTNFVGVYIS
YYLDGATGGVIVTLQTLLFLVAFLFSPKYGLLTRNKKAVENV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitC YP_217783.1 iron transporter: fur regulated Virulence SPI-1 Protein 2e-66 63
sitC NP_461784.1 permease Virulence SPI-1 Protein 2e-66 63
sitC NP_457257.1 Iron transport protein, inner membrane component Virulence SPI-1 Protein 2e-66 63
sitC NP_806466.1 iron transporter inner membrane protein Virulence SPI-1 Protein 2e-66 63
sitC AAD41067.1 SitC Virulence centisome 63 pathogenicity island Protein 2e-66 63

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HIB_04720 YP_005178502.1 putative ABC-type chelated iron transport system, permease component BAC0441 Protein 2e-71 71
HIB_04720 YP_005178502.1 putative ABC-type chelated iron transport system, permease component BAC0351 Protein 1e-66 63

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HIB_04720 YP_005178502.1 putative ABC-type chelated iron transport system, permease component VFG0527 Protein 1e-66 63