Gene Information

Name : HIB_04710 (HIB_04710)
Accession : YP_005178501.1
Strain : Haemophilus influenzae 10810
Genome accession: NC_016809
Putative virulence/resistance : Virulence
Product : putative ABC-type chelated iron transport system, permease component
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 479226 - 480041 bp
Length : 816 bp
Strand : -
Note : -

DNA sequence : 
ATGTTTGATTGGCTTTTAGAACCGCTACAATTTGAGTTTATGCAAAATGCCTTATTGACTGCATTGATTGTTTCTATTAT
CTGTGCATTACTTTCTTGCTATTTAGTCTTGAAAGGTTGGTCATTAATGGGCGATGCAATTTCTCACGCTGTATTACCTG
GTATTGTACTCGCTTATTTGGCAGGAATTCCTTTAGCCATTGGCGCATTTTTTTCAGGTATTTTTTGCTCCCTTGGTGTG
GGATATTTAAAAGAAAATAGTCGCATAAAAGAAGATACTGCAATGGGCATTGTATTTTCTGGAATGTTTGCCATTGGTCT
TGTTATGTTCACCAAAATTCAAACAGAACAGCATTTAACCCATATTTTGTTTGGTAATGTGTTGGGTGTAAGTTATCAAG
AGCTTATTCAAAGTGCGGTCATTTCTGCGATAATTTTTTGTCTGATTGTTTTCAAACGTAAAGACTTTCTGCTTTATTGT
TTTGATCCAAGCCACGCCCGTGTTGCAGGGCTTTCTCCTAAAATTTTACATTATGGTTTGTTAATGCTGCTTGCTTTAAC
TATTGTAAGCACGATGCAAGTGGTTGGCGTTATTTTGGTGGTGGCAATGTTAATTGCACCAGGAATTACTGCACTTACGC
TAACAAAATCTTTTGATAAAATGCTATGGATTGCTATTGTCAGTTCCATTACATCAAGCCTAATTGGCGTAATCTTGAGC
TATCATTTTGATGCCTCAACAGGTGCTTGTATTATTCTTCTGCAAGCCGCATTTTTTGTTATAGCATTAGCTTATAGCAA
GATTAGAATAAGATAA

Protein sequence : 
MFDWLLEPLQFEFMQNALLTALIVSIICALLSCYLVLKGWSLMGDAISHAVLPGIVLAYLAGIPLAIGAFFSGIFCSLGV
GYLKENSRIKEDTAMGIVFSGMFAIGLVMFTKIQTEQHLTHILFGNVLGVSYQELIQSAVISAIIFCLIVFKRKDFLLYC
FDPSHARVAGLSPKILHYGLLMLLALTIVSTMQVVGVILVVAMLIAPGITALTLTKSFDKMLWIAIVSSITSSLIGVILS
YHFDASTGACIILLQAAFFVIALAYSKIRIR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitD NP_461785.1 permease Virulence SPI-1 Protein 2e-67 55
sitD AAD41068.1 SitD Virulence centisome 63 pathogenicity island Protein 1e-67 55
sitD YP_217784.1 iron transporter: fur regulated Virulence SPI-1 Protein 3e-67 54
sitD NP_457258.1 Iron transport protein, inner membrane component Virulence SPI-1 Protein 3e-67 54
sitD NP_806467.1 iron transporter inner membrane protein Virulence SPI-1 Protein 3e-67 54

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HIB_04710 YP_005178501.1 putative ABC-type chelated iron transport system, permease component BAC0442 Protein 6e-81 62
HIB_04710 YP_005178501.1 putative ABC-type chelated iron transport system, permease component BAC0352 Protein 9e-68 55
HIB_04710 YP_005178501.1 putative ABC-type chelated iron transport system, permease component BAC0441 Protein 9e-42 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HIB_04710 YP_005178501.1 putative ABC-type chelated iron transport system, permease component VFG0528 Protein 8e-68 55