|
Name : HIB_14360 (HIB_14360) Accession : YP_005179461.1 Strain : Haemophilus influenzae 10810 Genome accession: NC_016809 Putative virulence/resistance : Unknown Product : putative type I restriction enzyme HindVIIP R protein Function : - COG functional category : - COG ID : - EC number : - Position : 1495802 - 1498984 bp Length : 3183 bp Strand : - Note : - DNA sequence : ATGCTCAACGAAAATGACATCAAACAACTTACCCTTCAACGCCTGCAATCCCTCGGTTGGGAATATCGCTACGGTAAAGA CTTGCCTGTTCATGAGGGCAAGTTTGCCCGTGGCGATTTGAGCGGCGTAGTCTTTGTTGAGCAACTGCGTGAGGCGGTGC GTAAACTTAATCCTCAGCTGCCTGAAAGTGCGGTGGATTCTGTAGTGAAATCGGCGACGAAAAGCGATATTGGCGACTTG GTGGTACGCAATCAGGCGTTTTATAAACTGCTGCGTGATGGCGTGCGGGTGGAATATCAGGCTCCCAATAGCCACGGACA AAATGAGCAGAAAATCGAGATGGCGCGTTTGGTGGATTTCGAGCATTGGGGAAACAACCGTTTTGTCGCCGTCAATCAGT TGGAAATCCGCAGCCGTAAAGGGGGCAAGCGGATTCCCGATATTACCGGCTTTGTAAATGGCTTACCGTTGGTGGTATTT GAGCTCAAAAATCCACTACGTGAATCGGCGGATTTGTTGCAGGCGTTTAATCAGTTTGAAACCTATAAAGATGAAATTGC CGAGCTGTTTGTTTACAACCAAGCCCTGATTATTTCAGACGGTATTGTCGCCCGTTTGGGTTCGCTTTCGGCAGATTTCC AACGCTTTACGCCGTGGAAAGTGGTCGATGAAAAAAATAAAAGCGCACGGTTATATTTTGACGATGAGTTGCAAAGCCTG CTTAATGGCTTGCTAAAGCCTAAGGATTTATTGGACTATATCCGCTATTTCGTCTTGTTTGAACGAGATTCCGTTGGCAA AACCATTAAAAAAATCGCGGCGTACCATCAATATTACGGCGTAAATGAAGCAGTAGAATCCACGATTTTTGCCACAAGCG AGCAAGGCGATAAACGCATTGGTGTGATGTGGCATACGCAGGGTTCGGGCAAGTCGATTTCGATGCTGTTTTATGCAGGC AAACTGCTTGCACAGCCTGAATTGAAAAATCCTACCATTGTAGTGGTTACCGACCGCAACGATTTAGATGGTCAGCTCTT CCAAACCTTTTCTTCAGGCAAAGATTTAATCAAGCAAACACCGCAACAAGTGGAAGACCGTGATCAACTACGCCAACTGC TCGCGCAAAATGAAGTCGGCGGCGTGTTTTTTACTACGATTCAGAAATTCGCCCTAAATGAGGAAGAAAGCCGCTTCCCT ATTTTAAATGAGCGCAACAATATTATTGTGATCAGCGATGAGGCTCACCGCAGCCAATATGGCTTTACGCAAAAGCTGCA TAACGGCAAGTTTCAGACAGGCTACGCCCGCCATTTGCGTGATGCTTTACCTAATGCCTCGTTTATTGGTTTTACAGGTA CGCCAATTAGCCTTGAAGATAAGGACACGCAAGATGTGTTCGGTCGTTATGTGTCCATTTATGACTTGCAAGATGCGGTG GAAGATGGCGCAACCGTGCCGATTGTGTATGAAGCACGCCAAATCAAGCTAGCGGAGAATGCTAATCACGATGAATTATT TGCAGAAATTGATGAACTGCTGGAAGGCGAAAAAAACCCGAAATTACGCTTGCGAGAAAAATTGCTCGGCTCAGAAGCTC GATTGCATGATTTAGCGGTCGATTTTGTGCAACATTTTGCCAAACGCAATGAAGTGGTGGACAGCAAAGCGATGATGGTG GTTTCCAGCCGTCAGATTTGCGTGGATTTGTATAATCAGATCATCGCTCTGCACCCTGAATGGCATTCGGACAATATTAA CGAAGGGGCGATTAAAATTGTGATGACAGGTTCTGCTTCCGATGCGTCTGAAATGCAGAAACACGTTTACAGTAAACAGG AAAAACAAACGCTAGAACGCCGCTTTAAAGACCCGAACGATCCGCTGAAGGTGGTGATTGTGCGTGATATGTGGCTGACA GGCTTTGATGCGCCTTGCTGTAACACGATGTATATCGACAAGCCGATGCAGGGGCATAACCTAATGCAAGCCATCGCCCG AGTAAACCGTGTATTCCGTAATAAAAGCCGAGAAAATGGTGGCTTGATTGTGGATTATGTAGGCATTGCTGACGAGCTCG AAAAAGCCACTCGGCAATATACAAACTCACAAGGCAAGGGCAAACTGGCTGATAGCGTGATTGATGTATTCTTTAAAATG AAAGAGCATTTAGAAGTTATCCGCAGCCTGTTTGCAACGCCAGTTGAAGGGAAAACCTTTGATGTTCAGGCTGCCTTAGA AAAAGATAATCCGAATGATCTTTTGATGGCGATTCGTTTTGCCGCCAACCATATTTTAAGCCTTGATCAATTATCGTTTG ATGGCAAAGCGCACGAGCAGCATTGGTTTAATAAAAAAGAAACCGAACCACGTAAAAAAGCCTTTTTGAAAACGGCAGGC TTGGTAAAAAAAGGCTATATGCTGTGCGGCGCATTAGCTGAAGTTGAGCCGTATAACCAAGAAATCGCCTTTTATGATGC CGTACGGGCAATTTTAACTAAACGTGAACAAAAAGGCACAGGCACAAATGAAAGACAGATTTTATTGAAAAAACTGGTTA ATCAAACTGTGTATTCTGAAGGCGTGATTGATTTATTCGATCTGCTAGAAAAACCACAACCACAAATTAGCTTACTTTCC GAGGAATTTTTACAAACTGTAAAAAATAGCCCAACTAAAAATTTATGGGTTAGCGCGATGGAGCGTTATTTGGCAAGTGA AATTAAAGTTAAATCAGGCACAAACTTAACATTGCAAAAAGATTTTGAAAAGCGTTTGAAGGAAGCATTGAATCAATACC ACAATCACAATTTGACTGTGGTAGAGATTTTGGACGAACTCTTTAAAATGAGCCAAGATTTCCAAGAACGTTTAGCATTA GGGAAAAAACTAGGATTAACCAAGGAAGAACTAGCCTTCTATGAAGCTCTATCTCAAAATCAAAGTGCAAAAGATTTGAT GGGTGATGAAGTGCTTTCTAAACTGGCGAAAGAAATCACGGAAACACTTAGAAAATCGGTCACAATCGACTGGCAGTACA AAGAAGCGGTGCGGGCAAGAATTAGATTACTCGTTCGACGTGCCTTACAAAAATATAAATACCCGCCTGATAAACAGGAA GAAGCGGTAACTTATGTGATTAAACAAGCTGAAGAAATTGCTGAGGATTTAACTGGTTTATAA Protein sequence : MLNENDIKQLTLQRLQSLGWEYRYGKDLPVHEGKFARGDLSGVVFVEQLREAVRKLNPQLPESAVDSVVKSATKSDIGDL VVRNQAFYKLLRDGVRVEYQAPNSHGQNEQKIEMARLVDFEHWGNNRFVAVNQLEIRSRKGGKRIPDITGFVNGLPLVVF ELKNPLRESADLLQAFNQFETYKDEIAELFVYNQALIISDGIVARLGSLSADFQRFTPWKVVDEKNKSARLYFDDELQSL LNGLLKPKDLLDYIRYFVLFERDSVGKTIKKIAAYHQYYGVNEAVESTIFATSEQGDKRIGVMWHTQGSGKSISMLFYAG KLLAQPELKNPTIVVVTDRNDLDGQLFQTFSSGKDLIKQTPQQVEDRDQLRQLLAQNEVGGVFFTTIQKFALNEEESRFP ILNERNNIIVISDEAHRSQYGFTQKLHNGKFQTGYARHLRDALPNASFIGFTGTPISLEDKDTQDVFGRYVSIYDLQDAV EDGATVPIVYEARQIKLAENANHDELFAEIDELLEGEKNPKLRLREKLLGSEARLHDLAVDFVQHFAKRNEVVDSKAMMV VSSRQICVDLYNQIIALHPEWHSDNINEGAIKIVMTGSASDASEMQKHVYSKQEKQTLERRFKDPNDPLKVVIVRDMWLT GFDAPCCNTMYIDKPMQGHNLMQAIARVNRVFRNKSRENGGLIVDYVGIADELEKATRQYTNSQGKGKLADSVIDVFFKM KEHLEVIRSLFATPVEGKTFDVQAALEKDNPNDLLMAIRFAANHILSLDQLSFDGKAHEQHWFNKKETEPRKKAFLKTAG LVKKGYMLCGALAEVEPYNQEIAFYDAVRAILTKREQKGTGTNERQILLKKLVNQTVYSEGVIDLFDLLEKPQPQISLLS EEFLQTVKNSPTKNLWVSAMERYLASEIKVKSGTNLTLQKDFEKRLKEALNQYHNHNLTVVEILDELFKMSQDFQERLAL GKKLGLTKEELAFYEALSQNQSAKDLMGDEVLSKLAKEITETLRKSVTIDWQYKEAVRARIRLLVRRALQKYKYPPDKQE EAVTYVIKQAEEIAEDLTGL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| api52 | CAF28526.1 | hsdr-like Type I restriction enzyme | Not tested | YAPI | Protein | 0.0 | 49 |
| hsdR | YP_251977.1 | type I restriction-modification system restriction subunit | Not tested | SCCmec | Protein | 0.0 | 41 |
| hsdR | BAH57699.1 | type I restriction-modification system endonuclease homologue | Not tested | Type-VII SCCmec | Protein | 0.0 | 41 |
| hsdR | BAD24840.1 | type I restriction-modification system endonuclease homologue | Not tested | Type-V SCCmec | Protein | 0.0 | 41 |
