Gene Information

Name : hexB (Pmu_08580)
Accession : YP_005176730.1
Strain : Pasteurella multocida 36950
Genome accession: NC_016808
Putative virulence/resistance : Virulence
Product : protein HexB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 918347 - 919144 bp
Length : 798 bp
Strand : +
Note : capsule polysaccharide export inner-membrane protein

DNA sequence : 
ATGTTATACGATGACCAAACTACACTAAAACACGCTTTTATCATTCAAAATAGAGTGATTGGCGCTCTCCTAATGCGAGA
GATCATCACACGCTATGGCAGAAAGAACCTCGGTTTTTTATGGCTATTTGTTGAACCGCTCTTAATGACAGGGCTAATTG
TGATCTTGTGGAGTACCTTCCGCGCAGATCAATTTTCTAACCTGAATATCATGGCATTCATGACCACAGGCTACCCGTTG
ATGATGATGTGGCGCAATGCATCAAATAGGGCGATTGGTGCGGTTTCTGCCAATAGTACCCTACTCTATCATCGTAATGT
CAGAGTGCTTGACACGTTAATTGCTAGGATGATCTTGGAAATATCCGGTGCAACCATTGCTCAAGTCGTTTTAATGAGTT
TTTGTATTGCACTGGATTGGATACCTATGCCACAGGATATTTTCTATATGCTACTTGCATGGTTTTTGATGGCGATATTT
GCAATCGGATTTGGCTTTATTATTTGTTCTATATCGCATCATATTGAAGTATTCGGTAAATTGTGGGGAATTCTAAGCTT
TGCGATGATGCCATTATCTGGCACCTTCTTTTTTGTTTACAATCTCCCCCCACAAGCGAGAGAATATTTACTCTGGATGC
CAATGATTCATGGTTCAGAAATGTTCAGACACGGGTACTTTGGTGATTCTGTTATTACACTAGAAAATCCTTATTTCCTC
ATTTTATGTGACTTAATTTTTCTACTAATTGGGTTATTAATGGTTGCACACTTCAGTAAAGGGATAGAACCTCGATGA

Protein sequence : 
MLYDDQTTLKHAFIIQNRVIGALLMREIITRYGRKNLGFLWLFVEPLLMTGLIVILWSTFRADQFSNLNIMAFMTTGYPL
MMMWRNASNRAIGAVSANSTLLYHRNVRVLDTLIARMILEISGATIAQVVLMSFCIALDWIPMPQDIFYMLLAWFLMAIF
AIGFGFIICSISHHIEVFGKLWGILSFAMMPLSGTFFFVYNLPPQAREYLLWMPMIHGSEMFRHGYFGDSVITLENPYFL
ILCDLIFLLIGLLMVAHFSKGIEPR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ctrC NP_273137.1 capsule polysaccharide export inner-membrane protein Not tested IHT-A Protein 4e-74 66

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
hexB YP_005176730.1 protein HexB VFG0257 Protein 2e-74 66
hexB YP_005176730.1 protein HexB VFG0685 Protein 2e-76 64
hexB YP_005176730.1 protein HexB VFG0697 Protein 2e-76 64
hexB YP_005176730.1 protein HexB VFG2564 Protein 8e-40 47