Gene Information

Name : hexD (Pmu_08560)
Accession : YP_005176728.1
Strain : Pasteurella multocida 36950
Genome accession: NC_016808
Putative virulence/resistance : Virulence
Product : protein HexD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 916020 - 917201 bp
Length : 1182 bp
Strand : +
Note : capsule polysaccharide export

DNA sequence : 
ATGAAACCAATAAAAACATTATCTATTTCTTTTATCACAACGCTCATCCTCGCTGGCTGTCATAGCATGCCAACTTCGGG
ACCCGCTCAAAATCATATTATTGGGTTAAAAAAACCACAAAATAAGAGCTTGCCAAGTGTTGATGTGATTGAAATGAATG
ATAAAGTAGCACACACTTTGTTTAAACAAAAGCAATCGCAATCCTTTACTCAATTCAAACAGCAAAATAGCAACTATGCA
GATATCATTAATGTTGGCGATACATTAGATGTGTTGATTTGGGAAGCCGCACCCGCTATTTTATTCGGCAGTGTTCTGTC
ACAAACTGGTAGTGGCGGTGCAAATCTCACGACATTACCCGAACAAATTGTTGCACGCAATGGAAAAATCACAATCCCAT
TTTTAGGCCCTATCTTAGTAAAAGGCAAAACACCAGAGCAAATTCAAAGAGATATTGCTCATGCGTTATCCTCCTTAGCG
AATAAACCTCAGGTGATTGTTCGTTTAAATAAAAATAACTCAAAAAATGTCACCATTCTCCGCCAAGGCAATAGTGTCAG
AATGCCATTAACATCACAAGGTGAACGTGTACTTGATGCTATTGCCGCAGTGGGCGGTGCCACAGAAAATCTACAAGATA
TTTCCGTTCAACTTACACGTGGTAAAGAAGTAAAAATGCTTTCCTTAGAAAAATTAGCCACTCATCCTGAAGAAAACATT
CTGCTACGTTCAAATGATGTCGTTACATTACTGAATAAACCTCTTAGTTTCACAGGATTAGGTGCCCTCGGGACAAATAA
ACAGGTGAAATTCTCTGCGAATGGCTTAACACTCGCAGAAGGCATCGGAGAAATGGGTGGACTATTAGATAACCGTGCTG
ATCCTAAAGGGGTTTTTGTCTTCCGTTATATTCCATTTAATAAATTATCTCTCGCAGAACAAACTAAATGGAAAGCTCGT
GGCTATGATAACGACATGGAGATTCCAACAGTTTATAGTGTCAATCTACTTAATCCAAACGCGTTGTTTTGGTTACAACG
TTTCCCTATTCAAGATAAAGATTTAGTTTATGTATCAAATGCACCAATGGCAGAATTCCAAAAATTCTTAAAATTAGTGT
TTTCTATCACCTCTCCTGTTACGGGTACACTTCATAATATTAATGTAATTAAAAATTTATAA

Protein sequence : 
MKPIKTLSISFITTLILAGCHSMPTSGPAQNHIIGLKKPQNKSLPSVDVIEMNDKVAHTLFKQKQSQSFTQFKQQNSNYA
DIINVGDTLDVLIWEAAPAILFGSVLSQTGSGGANLTTLPEQIVARNGKITIPFLGPILVKGKTPEQIQRDIAHALSSLA
NKPQVIVRLNKNNSKNVTILRQGNSVRMPLTSQGERVLDAIAAVGGATENLQDISVQLTRGKEVKMLSLEKLATHPEENI
LLRSNDVVTLLNKPLSFTGLGALGTNKQVKFSANGLTLAEGIGEMGGLLDNRADPKGVFVFRYIPFNKLSLAEQTKWKAR
GYDNDMEIPTVYSVNLLNPNALFWLQRFPIQDKDLVYVSNAPMAEFQKFLKLVFSITSPVTGTLHNINVIKNL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ctrA NP_273135.1 capsule polysaccharide export outer membrane protein Not tested IHT-A Protein 1e-89 51

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
hexD YP_005176728.1 protein HexD VFG0699 Protein 8e-107 53
hexD YP_005176728.1 protein HexD VFG0687 Protein 8e-107 53
hexD YP_005176728.1 protein HexD VFG0255 Protein 4e-90 51
hexD YP_005176728.1 protein HexD VFG2566 Protein 2e-70 41