Gene Information

Name : phyA (Pmu_08510)
Accession : YP_005176723.1
Strain : Pasteurella multocida 36950
Genome accession: NC_016808
Putative virulence/resistance : Virulence
Product : protein PhyA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 906075 - 908132 bp
Length : 2058 bp
Strand : -
Note : capsule polysaccharide modification protein

DNA sequence :
ATGTATCAAGAGTTTCTTATTTTTTCTAAAGGGATGTTAAAAATTCCTTATTTAAGCGGTTTTTTTACCCAACGCTTGAA
AATGTTCTCTCCATTTGTCACATGGAAAAAGGAGAGAACATGTATTTTAGAATGGGGATATAAAGCATCATCAAAGAAAG
CGAGGTATTTTGCACAACAACATGATTTACCTTATGCGACGATAGAAGATGGTTTTTTACGTTCTATTGGACTGGGTGTG
GATGGGTATCCACCTTTCTCATTAGTGTACGATGATATTGGTATTTATTATGATATCAATCAGCCTTCTCGTTTAGAAAA
CTTAATTCTTTCTCAAGATGTATTACTTCAGGAAAAAGTCGATCAAGTTGAATATGCAATTGAATTAATTTGTACACATA
ACCTTTCCAAATATAACCACGCTATTGATACACCTTTACAGAATACGAAGAGGCCGATTGTCTTAGTCGTTGATCAAACA
TATGGCGATATGGCAGTTACTTTCGGGAATGCCGAGCAGAGTGATTTTCTACATATGTTAGAACGTGCGATTATTGAAAA
TCCAACAGCAGAAATCTGGTTAAAAACCCATCCTGATGTAATGTGTGGTAAAAAACAAGGCTATTTAACGGAATATCAGC
AATTTCCAAGAGTAAAAGTATTATCAGAAGATTTTAATTCTATCTCACTACTAAAGCATGTTGATAAAGTTTATTGCGTG
ACATCTCACACTGGGTTTGAGGCCCTTTTGTTAGGAAAAACTGTCGTGACTTTTGGGGCTGCCTGGTTTTCTGGTTGGGG
ATTGACGGATGATCGGAATGCGTATATTCGTCAGCTAAAACAGAGTAAGAGAAGAGCGAAGCGTTCATTGTTGCAGTTAT
TCTATGCTGCTTATTTTCAATATTGTCGTTATATTAATCCTAATACGGGTAAATCAGGCACATTGTTTGATGTCATTGAT
TATCTGATTCAAGCAAAAAAAGTAACCAATCAGTTAGCTGGTGATATTTATTGTGTGGGTATGCGCTTTTGGAAACGTAA
AGTGGTTCAACCCTTTTTTCAATTTCCACGCTGTCGTTTACATTTTGTGCTGAATGTGCATGAGCTAAAGCGATGTATTC
ACGAGAAATCTCAGGCTAAAATAGTGGTGTGGGGACATTCACACATTGAAGTAGTTGAATATGCCAAGCAACAGCAACTT
CCTCTTTTGAGAATGGAAGATGGTTTTTTACGTTCAGTTGGGTTAGGGTCTAATTTAACGCCACCGATATCATTAGTTTT
AGATGACGTTGGCATTTATTTTGACGCCCAATCTCGTTCCCGATTAGAGGATATTCTACAGCATCAATCCTTTACTCTAA
AGGATTTACAGCGCGCAGAAACGTTAAAGAAAACACTGATTGAGCAACATATTGGTAAATATAATGTGGGACATACACAC
TTATGCCTAACACACATCAGACAAAATAAACTTTTAGTTGTGGGACAAGTGGAAAATGATGCTTCAATTCAATATGGTTC
ACCGCATATTCGTACGAATGCAGAGTTATTATGTACGGTCAGAAAAAATAATCCCCAAGCCTATATTATTTATAAACCTC
ATCCTGATGTGGTTGCAGGCAATCGTAAAAACACAGATCGTCTAGATGATTATCGACAGTATGCTGATTTCGTGGTTGAG
AAAGCCAATATATTGGATTGCATTAACCAAGTGGATGAAGTGCATACGATGACCTCTTTAGCGGGGTTTGAAGCGTTACT
GCGCGAGAAAAAAGTACATTGTTATGGCTTGCCTTTTTATTCTAACTGGGGGCTAACAGTGGATCATCTTTCTCTAAACC
GAAGAAGTCGGAAGTTAAGTCTTTTAGAATTAATTGCTGGCGTGCTGATTTATTACCCACAATATATTGACCCAAAAACA
AAAACAATGATCGATGTGCAGCGAGCGGTTGATATTCTGATCGAGAAACGTCGAAAAATAAAAAATAATAAATTACATAC
AAATTATTTTATGAATATTTTTATGAAATTAAAAAATGTTTATTCTGTTTTGAGGTAG

Protein sequence :
MYQEFLIFSKGMLKIPYLSGFFTQRLKMFSPFVTWKKERTCILEWGYKASSKKARYFAQQHDLPYATIEDGFLRSIGLGV
DGYPPFSLVYDDIGIYYDINQPSRLENLILSQDVLLQEKVDQVEYAIELICTHNLSKYNHAIDTPLQNTKRPIVLVVDQT
YGDMAVTFGNAEQSDFLHMLERAIIENPTAEIWLKTHPDVMCGKKQGYLTEYQQFPRVKVLSEDFNSISLLKHVDKVYCV
TSHTGFEALLLGKTVVTFGAAWFSGWGLTDDRNAYIRQLKQSKRRAKRSLLQLFYAAYFQYCRYINPNTGKSGTLFDVID
YLIQAKKVTNQLAGDIYCVGMRFWKRKVVQPFFQFPRCRLHFVLNVHELKRCIHEKSQAKIVVWGHSHIEVVEYAKQQQL
PLLRMEDGFLRSVGLGSNLTPPISLVLDDVGIYFDAQSRSRLEDILQHQSFTLKDLQRAETLKKTLIEQHIGKYNVGHTH
LCLTHIRQNKLLVVGQVENDASIQYGSPHIRTNAELLCTVRKNNPQAYIIYKPHPDVVAGNRKNTDRLDDYRQYADFVVE
KANILDCINQVDEVHTMTSLAGFEALLREKKVHCYGLPFYSNWGLTVDHLSLNRRSRKLSLLELIAGVLIYYPQYIDPKT
KTMIDVQRAVDILIEKRRKIKNNKLHTNYFMNIFMKLKNVYSVLR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lipA NP_273145.1 capsule polysaccharide modification protein Not tested IHT-A Protein 2e-177 56
kpsC YP_854335.1 capsule polysaccharide export protein KpsC Not tested PAI I APEC-O1 Protein 5e-125 47
kpsC AAZ04470.1 capsule polysaccharide export protein Virulence PAI I APEC-O1 Protein 4e-125 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
phyA YP_005176723.1 protein PhyA VFG0259 Protein 8e-178 56
phyA YP_005176723.1 protein PhyA VFG0704 Protein 1e-154 55
phyA YP_005176723.1 protein PhyA VFG0692 Protein 7e-177 55