Gene Information

Name : phyB (Pmu_08500)
Accession : YP_005176722.1
Strain : Pasteurella multocida 36950
Genome accession: NC_016808
Putative virulence/resistance : Virulence
Product : protein PhyB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 904839 - 906065 bp
Length : 1227 bp
Strand : -
Note : capsule polysaccharide modification protein

DNA sequence :
ATGGATGTGCTTAAGCATAATTTAGATGAATTACTTGAATCATCAATGAACTATTTATTATTACAAGGTCCAATTGGTCC
TTTTTTTACAGAACTGTCAGCATGGCTAAAAACGTTTCACAAACAAGTATTTAAAATAAATTTTAATTCTGGTGATGAGG
CTTTTTATCCTAATTCTATTCCTCAGACTTTTGCCTACCAGGGACAGTTAGATCAGTTTGACCAGTATCTTCGTTTTTTT
TGTCACCAACATTCGATTGATGCGATCATTTGTTTTGGTGATACACGGGCTTATCATCGCATTGCTAAAATCGTTGCAGA
TAAACAGAAAATTTCGTTTTGGGTTTTTGAAGAAGGCTATTTTAGACCGGATTATGTGACGTTGGAGAAAAATGGCGTTA
ATGATTTTTCAACGCTCCCGAGAGATGCTAATTTTTTTTTGAAACAGGCACTTCATTGTCCACTTCCTCCTGAACCGTTA
AAGTTAGCAAAAGGCTTTATTCCATTGGCAACTATTGCGATAAAATACTATACCAAAGCCTACTTTAATCAAGATAAATA
TCCTGATTATCAACATCATCGTATTTTAGATTTGAAATATTATATTAAGTTATGGCTAACTTCAGGAATAAAAAGAGCTT
ACTATTATTGGCAAGATCGTTCTTTTGGGAAGAAAGTAGCAGCAGGTAAATTAGGGGATTTTTTCCTCGTGCCTTTGCAA
GTGTATGATGATAGTCAAGTGAGAATACATTGTGACTATGAAAGTGTTGACGCTTTTTTAAAGGAAATCTTGGAGTCATT
TATTTATCATGCTCCGAGCGCACTTAATTTGATTATCAAGCATCACCCAATGGATAGGGGATTTGTCGATTATGGGCATG
TAATTAAACAATATAAAACACAATATCCCGCGTTTAAAAAGCGAATCTTTTATGTTCATGACGTTCCGACACCCATTTTA
TTGAGAAAAGGGAAGGGAATGATTACCTTAAATAGTACAAGTGGAATTTCTGCCTTGTTACACCGTATGCCAGTTTTTAC
CTTAGGCAGAGCAAGTTACAACTTTGAAGGATTAACTTATCAAGGTAATTTGCACAGTTTCTGGCATAATAAGGGATTGC
CAGAGGCGAAAGTGTTTGAAGCATATCGAAAGTATCACTTATCTAAAACACAGATTAATGGGAGTTTCTATAGCAAAGTC
ATTTTACGCTATCCTTATAATCAATAA

Protein sequence :
MDVLKHNLDELLESSMNYLLLQGPIGPFFTELSAWLKTFHKQVFKINFNSGDEAFYPNSIPQTFAYQGQLDQFDQYLRFF
CHQHSIDAIICFGDTRAYHRIAKIVADKQKISFWVFEEGYFRPDYVTLEKNGVNDFSTLPRDANFFLKQALHCPLPPEPL
KLAKGFIPLATIAIKYYTKAYFNQDKYPDYQHHRILDLKYYIKLWLTSGIKRAYYYWQDRSFGKKVAAGKLGDFFLVPLQ
VYDDSQVRIHCDYESVDAFLKEILESFIYHAPSALNLIIKHHPMDRGFVDYGHVIKQYKTQYPAFKKRIFYVHDVPTPIL
LRKGKGMITLNSTSGISALLHRMPVFTLGRASYNFEGLTYQGNLHSFWHNKGLPEAKVFEAYRKYHLSKTQINGSFYSKV
ILRYPYNQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lipB NP_273146.1 capsule polysaccharide modification protein Not tested IHT-A Protein 9e-102 54

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
phyB YP_005176722.1 protein PhyB VFG0693 Protein 6e-140 67
phyB YP_005176722.1 protein PhyB VFG0705 Protein 6e-140 67
phyB YP_005176722.1 protein PhyB VFG0260 Protein 4e-102 54